Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CDKL1Q00532 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.82□□□□□ -0.04
CDKL1Q00532 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDKL1Q00532 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDKL1Q00532 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.82□□□□□ -0.04
CDKL1Q00532 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.82□□□□□ -0.04
CDKL1Q00532 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 AC018442.1-201ENST00000421439 2061 ntBASIC14.81□□□□□ -0.04
CDKL1Q00532 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CDKL1Q00532 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.81□□□□□ -0.04
CDKL1Q00532 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 AL359183.1-201ENST00000623796 2132 ntBASIC14.81□□□□□ -0.04
CDKL1Q00532 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CDKL1Q00532 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.81□□□□□ -0.04
CDKL1Q00532 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CDKL1Q00532 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 MIR661-201ENST00000384842 89 ntBASIC14.81□□□□□ -0.04
CDKL1Q00532 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CDKL1Q00532 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.81□□□□□ -0.04
CDKL1Q00532 AC098850.1-201ENST00000419919 790 ntBASIC14.81□□□□□ -0.04
CDKL1Q00532 AC114812.1-204ENST00000449669 728 ntBASIC14.81□□□□□ -0.04
CDKL1Q00532 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.81□□□□□ -0.04
CDKL1Q00532 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.81□□□□□ -0.04
CDKL1Q00532 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.81□□□□□ -0.04
CDKL1Q00532 API5-211ENST00000534695 560 ntTSL 5 BASIC14.81□□□□□ -0.04
CDKL1Q00532 ENPP7P5-201ENST00000541031 1031 ntBASIC14.81□□□□□ -0.04
CDKL1Q00532 AL359711.2-201ENST00000563105 872 ntBASIC14.81□□□□□ -0.04
CDKL1Q00532 SPDYE22P-201ENST00000582158 798 ntBASIC14.81□□□□□ -0.04
CDKL1Q00532 RN7SL204P-201ENST00000582831 262 ntBASIC14.81□□□□□ -0.04
CDKL1Q00532 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.81□□□□□ -0.04
CDKL1Q00532 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CDKL1Q00532 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.81□□□□□ -0.04
CDKL1Q00532 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.81□□□□□ -0.04
CDKL1Q00532 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL1Q00532 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CDKL1Q00532 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL1Q00532 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKL1Q00532 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL1Q00532 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL1Q00532 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL1Q00532 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL1Q00532 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.8□□□□□ -0.04
CDKL1Q00532 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL1Q00532 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKL1Q00532 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL1Q00532 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL1Q00532 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKL1Q00532 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKL1Q00532 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL1Q00532 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL1Q00532 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.8□□□□□ -0.04
CDKL1Q00532 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL1Q00532 MYCLP2-201ENST00000449268 967 ntBASIC14.8□□□□□ -0.04
CDKL1Q00532 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.8□□□□□ -0.04
CDKL1Q00532 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.8□□□□□ -0.04
CDKL1Q00532 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
CDKL1Q00532 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.8□□□□□ -0.04
CDKL1Q00532 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.8□□□□□ -0.04
CDKL1Q00532 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.8□□□□□ -0.04
CDKL1Q00532 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL1Q00532 CHCHD2P3-201ENST00000603038 451 ntBASIC14.8□□□□□ -0.04
CDKL1Q00532 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.8□□□□□ -0.04
CDKL1Q00532 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL1Q00532 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CDKL1Q00532 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKL1Q00532 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL1Q00532 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL1Q00532 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.8□□□□□ -0.04
CDKL1Q00532 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL1Q00532 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL1Q00532 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CDKL1Q00532 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL1Q00532 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDKL1Q00532 AL137783.1-201ENST00000623494 1896 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms