Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.19□□□□□ -0.14
RAE1P78406 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RAE1P78406 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.19□□□□□ -0.14
RAE1P78406 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.19□□□□□ -0.14
RAE1P78406 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.19□□□□□ -0.14
RAE1P78406 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.19□□□□□ -0.14
RAE1P78406 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.19□□□□□ -0.14
RAE1P78406 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.19□□□□□ -0.14
RAE1P78406 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.19□□□□□ -0.14
RAE1P78406 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAE1P78406 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RAE1P78406 AC006504.5-208ENST00000588784 2401 ntBASIC14.19□□□□□ -0.14
RAE1P78406 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAE1P78406 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.18□□□□□ -0.14
RAE1P78406 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RAE1P78406 MYADML-201ENST00000474610 2147 ntBASIC14.18□□□□□ -0.14
RAE1P78406 MRPL37P1-201ENST00000592451 1337 ntBASIC14.18□□□□□ -0.14
RAE1P78406 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAE1P78406 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RAE1P78406 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAE1P78406 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RAE1P78406 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAE1P78406 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAE1P78406 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RAE1P78406 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
RAE1P78406 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAE1P78406 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAE1P78406 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAE1P78406 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.18□□□□□ -0.14
RAE1P78406 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAE1P78406 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RAE1P78406 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.18□□□□□ -0.14
RAE1P78406 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAE1P78406 PTP4A1P2-201ENST00000546033 454 ntBASIC14.18□□□□□ -0.14
RAE1P78406 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.18□□□□□ -0.14
RAE1P78406 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.18□□□□□ -0.14
RAE1P78406 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.18□□□□□ -0.14
RAE1P78406 GNRHR2-203ENST00000581100 1187 ntBASIC14.18□□□□□ -0.14
RAE1P78406 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.18□□□□□ -0.14
RAE1P78406 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.18□□□□□ -0.14
RAE1P78406 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RAE1P78406 AC138466.3-201ENST00000619983 221 ntBASIC14.18□□□□□ -0.14
RAE1P78406 ENPP7P14-201ENST00000621765 1040 ntBASIC14.18□□□□□ -0.14
RAE1P78406 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAE1P78406 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RAE1P78406 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.18□□□□□ -0.14
RAE1P78406 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAE1P78406 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.18□□□□□ -0.14
RAE1P78406 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAE1P78406 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.18□□□□□ -0.14
RAE1P78406 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.18□□□□□ -0.14
RAE1P78406 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.18□□□□□ -0.14
RAE1P78406 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAE1P78406 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAE1P78406 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.18□□□□□ -0.14
RAE1P78406 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RAE1P78406 AC012617.1-204ENST00000586340 2305 ntBASIC14.18□□□□□ -0.14
RAE1P78406 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAE1P78406 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.18□□□□□ -0.14
RAE1P78406 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAE1P78406 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.18□□□□□ -0.14
RAE1P78406 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RAE1P78406 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAE1P78406 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAE1P78406 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAE1P78406 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RAE1P78406 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.17□□□□□ -0.14
RAE1P78406 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAE1P78406 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.17□□□□□ -0.14
RAE1P78406 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAE1P78406 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.17□□□□□ -0.14
RAE1P78406 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.17□□□□□ -0.14
RAE1P78406 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RAE1P78406 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.17□□□□□ -0.14
RAE1P78406 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAE1P78406 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAE1P78406 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAE1P78406 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAE1P78406 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAE1P78406 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAE1P78406 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAE1P78406 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAE1P78406 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAE1P78406 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAE1P78406 AP006294.1-201ENST00000415407 339 ntBASIC14.17□□□□□ -0.14
RAE1P78406 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.17□□□□□ -0.14
RAE1P78406 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.17□□□□□ -0.14
RAE1P78406 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.17□□□□□ -0.14
RAE1P78406 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.17□□□□□ -0.14
RAE1P78406 RN7SL837P-201ENST00000463010 287 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms