Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNA1P78396 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.91■□□□□ 0.3
CCNA1P78396 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNA1P78396 RN7SL818P-201ENST00000485099 259 ntBASIC16.91■□□□□ 0.3
CCNA1P78396 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNA1P78396 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.91■□□□□ 0.3
CCNA1P78396 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.91■□□□□ 0.3
CCNA1P78396 MIR3188-201ENST00000583494 85 ntBASIC16.91■□□□□ 0.3
CCNA1P78396 AC087045.2-201ENST00000606279 1003 ntBASIC16.91■□□□□ 0.3
CCNA1P78396 RN7SL725P-201ENST00000606439 259 ntBASIC16.91■□□□□ 0.3
CCNA1P78396 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.91■□□□□ 0.3
CCNA1P78396 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNA1P78396 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCNA1P78396 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNA1P78396 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNA1P78396 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNA1P78396 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CCNA1P78396 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNA1P78396 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNA1P78396 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNA1P78396 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNA1P78396 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNA1P78396 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCNA1P78396 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNA1P78396 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNA1P78396 CAP2P1-201ENST00000557743 1390 ntBASIC16.9■□□□□ 0.3
CCNA1P78396 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CCNA1P78396 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNA1P78396 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNA1P78396 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNA1P78396 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNA1P78396 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNA1P78396 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNA1P78396 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNA1P78396 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNA1P78396 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNA1P78396 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCNA1P78396 AP000356.3-201ENST00000382243 753 ntBASIC16.9■□□□□ 0.3
CCNA1P78396 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCNA1P78396 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.9■□□□□ 0.3
CCNA1P78396 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNA1P78396 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCNA1P78396 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNA1P78396 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.9■□□□□ 0.3
CCNA1P78396 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.9■□□□□ 0.3
CCNA1P78396 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.9■□□□□ 0.3
CCNA1P78396 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNA1P78396 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNA1P78396 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNA1P78396 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNA1P78396 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNA1P78396 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNA1P78396 AC020658.6-201ENST00000623564 1870 ntBASIC16.9■□□□□ 0.3
CCNA1P78396 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNA1P78396 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCNA1P78396 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CCNA1P78396 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCNA1P78396 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.9■□□□□ 0.3
CCNA1P78396 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.9■□□□□ 0.3
CCNA1P78396 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNA1P78396 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCNA1P78396 CYP4F23P-201ENST00000593402 1579 ntBASIC16.89■□□□□ 0.3
CCNA1P78396 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.89■□□□□ 0.3
CCNA1P78396 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCNA1P78396 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCNA1P78396 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.89■□□□□ 0.29
CCNA1P78396 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNA1P78396 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCNA1P78396 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNA1P78396 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNA1P78396 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.89■□□□□ 0.29
CCNA1P78396 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.89■□□□□ 0.29
CCNA1P78396 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.89■□□□□ 0.29
CCNA1P78396 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.89■□□□□ 0.29
CCNA1P78396 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.89■□□□□ 0.29
CCNA1P78396 AP002803.1-201ENST00000528836 498 ntBASIC16.89■□□□□ 0.29
CCNA1P78396 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.89■□□□□ 0.29
CCNA1P78396 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.89■□□□□ 0.29
CCNA1P78396 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.89■□□□□ 0.29
CCNA1P78396 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.89■□□□□ 0.29
CCNA1P78396 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCNA1P78396 MIR3677-201ENST00000578964 60 ntBASIC16.89■□□□□ 0.29
CCNA1P78396 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.89■□□□□ 0.29
CCNA1P78396 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.89■□□□□ 0.29
CCNA1P78396 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CCNA1P78396 AC007718.1-201ENST00000621078 280 ntBASIC16.89■□□□□ 0.29
CCNA1P78396 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.89■□□□□ 0.29
CCNA1P78396 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.89■□□□□ 0.29
CCNA1P78396 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNA1P78396 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCNA1P78396 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNA1P78396 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCNA1P78396 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCNA1P78396 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNA1P78396 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCNA1P78396 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNA1P78396 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNA1P78396 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNA1P78396 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNA1P78396 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms