Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNRPFP62306 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.23■□□□□ 0.19
SNRPFP62306 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNRPFP62306 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNRPFP62306 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.23■□□□□ 0.19
SNRPFP62306 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNRPFP62306 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNRPFP62306 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.23■□□□□ 0.19
SNRPFP62306 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNRPFP62306 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNRPFP62306 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SNRPFP62306 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.22■□□□□ 0.19
SNRPFP62306 AC139712.1-201ENST00000378256 1875 ntBASIC16.22■□□□□ 0.19
SNRPFP62306 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 MYADML-201ENST00000474610 2147 ntBASIC16.22■□□□□ 0.19
SNRPFP62306 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.22■□□□□ 0.19
SNRPFP62306 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 CHMP1AP1-201ENST00000445563 662 ntBASIC16.22■□□□□ 0.19
SNRPFP62306 AL035414.1-201ENST00000451327 857 ntBASIC16.22■□□□□ 0.19
SNRPFP62306 CTBP2P5-201ENST00000454986 1264 ntBASIC16.22■□□□□ 0.19
SNRPFP62306 ACA64.2-201ENST00000459014 129 ntBASIC16.22■□□□□ 0.19
SNRPFP62306 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SNRPFP62306 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.22■□□□□ 0.19
SNRPFP62306 AC104989.1-201ENST00000519711 778 ntBASIC16.22■□□□□ 0.19
SNRPFP62306 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.22■□□□□ 0.19
SNRPFP62306 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SNRPFP62306 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.22■□□□□ 0.19
SNRPFP62306 AP005482.1-201ENST00000563722 1273 ntBASIC16.22■□□□□ 0.19
SNRPFP62306 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
SNRPFP62306 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.22■□□□□ 0.19
SNRPFP62306 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SNRPFP62306 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.22■□□□□ 0.19
SNRPFP62306 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.22■□□□□ 0.19
SNRPFP62306 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.22■□□□□ 0.19
SNRPFP62306 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.22■□□□□ 0.19
SNRPFP62306 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
SNRPFP62306 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.22■□□□□ 0.19
SNRPFP62306 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SNRPFP62306 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SNRPFP62306 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SNRPFP62306 AC009093.2-202ENST00000620513 2079 ntBASIC16.22■□□□□ 0.19
SNRPFP62306 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.22■□□□□ 0.19
SNRPFP62306 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNRPFP62306 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNRPFP62306 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.21■□□□□ 0.19
SNRPFP62306 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.21■□□□□ 0.19
SNRPFP62306 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SNRPFP62306 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SNRPFP62306 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNRPFP62306 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SNRPFP62306 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SNRPFP62306 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SNRPFP62306 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SNRPFP62306 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SNRPFP62306 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNRPFP62306 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.21■□□□□ 0.19
SNRPFP62306 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SNRPFP62306 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNRPFP62306 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SNRPFP62306 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNRPFP62306 MIR1909-201ENST00000411312 80 ntBASIC16.21■□□□□ 0.19
SNRPFP62306 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.21■□□□□ 0.19
SNRPFP62306 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.21■□□□□ 0.19
SNRPFP62306 CNN2P10-201ENST00000443067 918 ntBASIC16.21■□□□□ 0.19
SNRPFP62306 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.21■□□□□ 0.19
SNRPFP62306 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SNRPFP62306 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.21■□□□□ 0.19
SNRPFP62306 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SNRPFP62306 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNRPFP62306 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNRPFP62306 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNRPFP62306 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SNRPFP62306 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNRPFP62306 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.21■□□□□ 0.19
SNRPFP62306 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNRPFP62306 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SNRPFP62306 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SNRPFP62306 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.21■□□□□ 0.19
SNRPFP62306 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SNRPFP62306 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SNRPFP62306 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SNRPFP62306 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms