Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
VSX2P58304 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
VSX2P58304 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VSX2P58304 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.41□□□□□ -0.1
VSX2P58304 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
VSX2P58304 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VSX2P58304 POM121L8P-201ENST00000417732 1281 ntBASIC14.41□□□□□ -0.1
VSX2P58304 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.41□□□□□ -0.1
VSX2P58304 POM121L9P-203ENST00000441984 1285 ntBASIC14.41□□□□□ -0.1
VSX2P58304 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.41□□□□□ -0.1
VSX2P58304 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.41□□□□□ -0.1
VSX2P58304 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
VSX2P58304 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
VSX2P58304 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.41□□□□□ -0.1
VSX2P58304 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VSX2P58304 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.4□□□□□ -0.1
VSX2P58304 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.4□□□□□ -0.1
VSX2P58304 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.4□□□□□ -0.1
VSX2P58304 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.4□□□□□ -0.1
VSX2P58304 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.4□□□□□ -0.1
VSX2P58304 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.4□□□□□ -0.1
VSX2P58304 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.4□□□□□ -0.1
VSX2P58304 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
VSX2P58304 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
VSX2P58304 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.4□□□□□ -0.1
VSX2P58304 FAM21FP-201ENST00000426241 1131 ntBASIC14.4□□□□□ -0.1
VSX2P58304 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.4□□□□□ -0.1
VSX2P58304 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.4□□□□□ -0.1
VSX2P58304 YBX1P6-201ENST00000442962 1002 ntBASIC14.4□□□□□ -0.1
VSX2P58304 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.4□□□□□ -0.1
VSX2P58304 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.4□□□□□ -0.1
VSX2P58304 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.4□□□□□ -0.1
VSX2P58304 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.4□□□□□ -0.1
VSX2P58304 AC023310.1-201ENST00000554836 735 ntBASIC14.4□□□□□ -0.1
VSX2P58304 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.4□□□□□ -0.1
VSX2P58304 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.4□□□□□ -0.1
VSX2P58304 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.4□□□□□ -0.1
VSX2P58304 AC008687.7-202ENST00000637404 953 ntBASIC14.4□□□□□ -0.1
VSX2P58304 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 ZBED1P1-201ENST00000502364 1930 ntBASIC14.4□□□□□ -0.1
VSX2P58304 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.4□□□□□ -0.1
VSX2P58304 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.4□□□□□ -0.1
VSX2P58304 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
VSX2P58304 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
VSX2P58304 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 AGAP7P-201ENST00000582299 2062 ntBASIC14.4□□□□□ -0.1
VSX2P58304 AGAP14-201ENST00000624701 2060 ntBASIC14.4□□□□□ -0.1
VSX2P58304 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.4□□□□□ -0.1
VSX2P58304 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
VSX2P58304 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VSX2P58304 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms