Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK4P57078 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RIPK4P57078 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC19.56■□□□□ 0.72
RIPK4P57078 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK4P57078 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK4P57078 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK4P57078 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK4P57078 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC19.56■□□□□ 0.72
RIPK4P57078 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK4P57078 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK4P57078 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK4P57078 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK4P57078 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK4P57078 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK4P57078 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK4P57078 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC19.56■□□□□ 0.72
RIPK4P57078 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK4P57078 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RIPK4P57078 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC19.56■□□□□ 0.72
RIPK4P57078 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK4P57078 AC079178.1-201ENST00000420915 656 ntBASIC19.56■□□□□ 0.72
RIPK4P57078 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RIPK4P57078 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.56■□□□□ 0.72
RIPK4P57078 AC108725.1-201ENST00000495472 409 ntBASIC19.56■□□□□ 0.72
RIPK4P57078 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.56■□□□□ 0.72
RIPK4P57078 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RIPK4P57078 BX088702.1-201ENST00000610784 235 ntBASIC19.56■□□□□ 0.72
RIPK4P57078 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.56■□□□□ 0.72
RIPK4P57078 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC19.56■□□□□ 0.72
RIPK4P57078 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK4P57078 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RIPK4P57078 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC19.56■□□□□ 0.72
RIPK4P57078 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK4P57078 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RIPK4P57078 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RIPK4P57078 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RIPK4P57078 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
RIPK4P57078 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK4P57078 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RIPK4P57078 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK4P57078 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
RIPK4P57078 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC19.56■□□□□ 0.72
RIPK4P57078 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIPK4P57078 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIPK4P57078 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
RIPK4P57078 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RIPK4P57078 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIPK4P57078 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIPK4P57078 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC19.55■□□□□ 0.72
RIPK4P57078 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC19.55■□□□□ 0.72
RIPK4P57078 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC19.55■□□□□ 0.72
RIPK4P57078 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
RIPK4P57078 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIPK4P57078 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19.55■□□□□ 0.72
RIPK4P57078 AL591846.1-201ENST00000451736 433 ntBASIC19.55■□□□□ 0.72
RIPK4P57078 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC19.55■□□□□ 0.72
RIPK4P57078 RN7SL219P-201ENST00000582872 296 ntBASIC19.55■□□□□ 0.72
RIPK4P57078 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIPK4P57078 AC091271.1-201ENST00000611877 1162 ntBASIC19.55■□□□□ 0.72
RIPK4P57078 AL096828.3-201ENST00000615354 462 ntBASIC19.55■□□□□ 0.72
RIPK4P57078 AL136301.1-201ENST00000615830 422 ntBASIC19.55■□□□□ 0.72
RIPK4P57078 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC19.55■□□□□ 0.72
RIPK4P57078 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
RIPK4P57078 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RIPK4P57078 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIPK4P57078 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC19.54■□□□□ 0.72
RIPK4P57078 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RIPK4P57078 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK4P57078 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK4P57078 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK4P57078 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK4P57078 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC19.54■□□□□ 0.72
RIPK4P57078 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK4P57078 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC19.54■□□□□ 0.72
RIPK4P57078 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK4P57078 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
RIPK4P57078 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK4P57078 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK4P57078 HSPB1P2-201ENST00000448722 546 ntBASIC19.54■□□□□ 0.72
RIPK4P57078 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RIPK4P57078 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.54■□□□□ 0.72
RIPK4P57078 VPS18-202ENST00000558474 873 ntTSL 3 BASIC19.54■□□□□ 0.72
RIPK4P57078 DERL2-202ENST00000570848 657 ntTSL 5 BASIC19.54■□□□□ 0.72
RIPK4P57078 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.54■□□□□ 0.72
RIPK4P57078 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC19.54■□□□□ 0.72
RIPK4P57078 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC19.54■□□□□ 0.72
RIPK4P57078 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
RIPK4P57078 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK4P57078 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC19.54■□□□□ 0.72
RIPK4P57078 CICP24-201ENST00000605464 2705 ntBASIC19.54■□□□□ 0.72
RIPK4P57078 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK4P57078 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK4P57078 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK4P57078 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RIPK4P57078 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC19.54■□□□□ 0.72
RIPK4P57078 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.54■□□□□ 0.72
RIPK4P57078 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RIPK4P57078 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RIPK4P57078 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RIPK4P57078 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms