Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.82□□□□□ -0.2
CLDN20P56880 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN20P56880 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDN20P56880 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDN20P56880 AL645728.2-202ENST00000641679 227 ntBASIC13.82□□□□□ -0.2
CLDN20P56880 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CLDN20P56880 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CLDN20P56880 AC093525.8-201ENST00000624099 1342 ntBASIC13.82□□□□□ -0.2
CLDN20P56880 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN20P56880 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CLDN20P56880 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.82□□□□□ -0.2
CLDN20P56880 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 HSPA7-201ENST00000445535 1927 ntBASIC13.82□□□□□ -0.2
CLDN20P56880 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CLDN20P56880 AC018665.1-201ENST00000622927 1362 ntBASIC13.82□□□□□ -0.2
CLDN20P56880 LINC01230-201ENST00000625222 3017 ntBASIC13.82□□□□□ -0.2
CLDN20P56880 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
CLDN20P56880 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN20P56880 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN20P56880 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN20P56880 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
CLDN20P56880 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CLDN20P56880 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN20P56880 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN20P56880 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CLDN20P56880 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
CLDN20P56880 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CLDN20P56880 ACKR1-201ENST00000368121 1240 ntBASIC13.81□□□□□ -0.2
CLDN20P56880 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN20P56880 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CLDN20P56880 BAATP1-201ENST00000412284 1225 ntBASIC13.81□□□□□ -0.2
CLDN20P56880 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN20P56880 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CLDN20P56880 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.81□□□□□ -0.2
CLDN20P56880 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.81□□□□□ -0.2
CLDN20P56880 KRT17P8-201ENST00000540749 863 ntBASIC13.81□□□□□ -0.2
CLDN20P56880 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.81□□□□□ -0.2
CLDN20P56880 SAMD11P1-201ENST00000571429 661 ntBASIC13.81□□□□□ -0.2
CLDN20P56880 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.81□□□□□ -0.2
CLDN20P56880 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.81□□□□□ -0.2
CLDN20P56880 BTNL10-201ENST00000595971 695 ntBASIC13.81□□□□□ -0.2
CLDN20P56880 AC233724.13-201ENST00000598383 410 ntBASIC13.81□□□□□ -0.2
CLDN20P56880 AL162274.1-201ENST00000617191 1098 ntBASIC13.81□□□□□ -0.2
CLDN20P56880 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 BX640514.1-201ENST00000583223 1918 ntBASIC13.81□□□□□ -0.2
CLDN20P56880 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN20P56880 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN20P56880 AC134312.5-201ENST00000568031 1313 ntBASIC13.81□□□□□ -0.2
CLDN20P56880 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN20P56880 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN20P56880 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN20P56880 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CLDN20P56880 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CLDN20P56880 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
CLDN20P56880 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN20P56880 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLDN20P56880 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CLDN20P56880 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
CLDN20P56880 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.8□□□□□ -0.2
CLDN20P56880 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN20P56880 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN20P56880 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN20P56880 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN20P56880 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN20P56880 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN20P56880 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN20P56880 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN20P56880 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CLDN20P56880 AL928921.2-201ENST00000641325 2442 ntBASIC13.8□□□□□ -0.2
CLDN20P56880 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN20P56880 AL158070.2-201ENST00000623713 1621 ntBASIC13.8□□□□□ -0.2
CLDN20P56880 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN20P56880 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms