Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
SUMO3P55854 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.56□□□□□ -0.24
SUMO3P55854 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.56□□□□□ -0.24
SUMO3P55854 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SUMO3P55854 AC232323.1-201ENST00000540724 2099 ntBASIC13.55□□□□□ -0.24
SUMO3P55854 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.55□□□□□ -0.24
SUMO3P55854 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.55□□□□□ -0.24
SUMO3P55854 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.55□□□□□ -0.24
SUMO3P55854 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.55□□□□□ -0.24
SUMO3P55854 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.55□□□□□ -0.24
SUMO3P55854 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.55□□□□□ -0.24
SUMO3P55854 AC004945.1-201ENST00000416738 983 ntBASIC13.55□□□□□ -0.24
SUMO3P55854 AC112492.5-201ENST00000421897 457 ntBASIC13.55□□□□□ -0.24
SUMO3P55854 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 CROCCP4-201ENST00000457096 498 ntBASIC13.55□□□□□ -0.24
SUMO3P55854 COX5BP1-201ENST00000507622 393 ntBASIC13.55□□□□□ -0.24
SUMO3P55854 AC104989.1-201ENST00000519711 778 ntBASIC13.55□□□□□ -0.24
SUMO3P55854 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.55□□□□□ -0.24
SUMO3P55854 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.55□□□□□ -0.24
SUMO3P55854 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.55□□□□□ -0.24
SUMO3P55854 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.55□□□□□ -0.24
SUMO3P55854 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 AC008687.7-202ENST00000637404 953 ntBASIC13.55□□□□□ -0.24
SUMO3P55854 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.55□□□□□ -0.24
SUMO3P55854 MTHFR-210ENST00000641407 2387 ntBASIC13.55□□□□□ -0.24
SUMO3P55854 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.55□□□□□ -0.24
SUMO3P55854 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SUMO3P55854 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
SUMO3P55854 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.55□□□□□ -0.24
SUMO3P55854 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 OR2I1P-210ENST00000642037 4691 ntBASIC13.55□□□□□ -0.24
SUMO3P55854 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SUMO3P55854 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.55□□□□□ -0.24
SUMO3P55854 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.55□□□□□ -0.24
SUMO3P55854 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SUMO3P55854 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.55□□□□□ -0.24
SUMO3P55854 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SUMO3P55854 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SUMO3P55854 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.55□□□□□ -0.24
SUMO3P55854 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SUMO3P55854 AC097376.2-205ENST00000610159 5334 ntBASIC13.54□□□□□ -0.24
SUMO3P55854 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.54□□□□□ -0.24
SUMO3P55854 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SUMO3P55854 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.54□□□□□ -0.24
SUMO3P55854 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.54□□□□□ -0.24
SUMO3P55854 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SUMO3P55854 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.54□□□□□ -0.24
SUMO3P55854 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.54□□□□□ -0.24
SUMO3P55854 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SUMO3P55854 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SUMO3P55854 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.54□□□□□ -0.24
SUMO3P55854 AL355994.2-201ENST00000447882 704 ntBASIC13.54□□□□□ -0.24
SUMO3P55854 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.54□□□□□ -0.24
SUMO3P55854 CTBP2P5-201ENST00000454986 1264 ntBASIC13.54□□□□□ -0.24
SUMO3P55854 ACA64.2-201ENST00000459014 129 ntBASIC13.54□□□□□ -0.24
SUMO3P55854 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.54□□□□□ -0.24
SUMO3P55854 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.54□□□□□ -0.24
SUMO3P55854 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.54□□□□□ -0.24
SUMO3P55854 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.54□□□□□ -0.24
SUMO3P55854 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SUMO3P55854 AC002472.3-201ENST00000640124 621 ntBASIC13.54□□□□□ -0.24
SUMO3P55854 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SUMO3P55854 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.54□□□□□ -0.24
SUMO3P55854 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SUMO3P55854 AC113367.3-201ENST00000508316 1912 ntBASIC13.54□□□□□ -0.24
SUMO3P55854 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.54□□□□□ -0.24
SUMO3P55854 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms