Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH6P55285 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH6P55285 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.64■□□□□ 0.09
CDH6P55285 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH6P55285 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.64■□□□□ 0.09
CDH6P55285 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
CDH6P55285 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.64■□□□□ 0.09
CDH6P55285 AL603764.1-201ENST00000636452 321 ntBASIC15.64■□□□□ 0.09
CDH6P55285 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH6P55285 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CDH6P55285 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH6P55285 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH6P55285 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH6P55285 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH6P55285 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CDH6P55285 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH6P55285 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH6P55285 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CDH6P55285 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH6P55285 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CDH6P55285 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH6P55285 AP001267.2-201ENST00000532619 2086 ntBASIC15.63■□□□□ 0.09
CDH6P55285 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH6P55285 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH6P55285 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CDH6P55285 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH6P55285 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH6P55285 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH6P55285 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.63■□□□□ 0.09
CDH6P55285 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH6P55285 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH6P55285 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CDH6P55285 AC022137.2-201ENST00000503482 481 ntBASIC15.63■□□□□ 0.09
CDH6P55285 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH6P55285 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.63■□□□□ 0.09
CDH6P55285 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH6P55285 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CDH6P55285 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH6P55285 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CDH6P55285 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH6P55285 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CDH6P55285 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH6P55285 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH6P55285 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH6P55285 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH6P55285 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH6P55285 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.62■□□□□ 0.09
CDH6P55285 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH6P55285 AC067750.1-201ENST00000608826 6545 ntBASIC15.62■□□□□ 0.09
CDH6P55285 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH6P55285 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH6P55285 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.62■□□□□ 0.09
CDH6P55285 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CDH6P55285 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CDH6P55285 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CDH6P55285 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms