Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.34□□□□□ -0.11
NR1H2P55055 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.34□□□□□ -0.11
NR1H2P55055 AC083964.2-201ENST00000623988 2396 ntBASIC14.34□□□□□ -0.11
NR1H2P55055 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.34□□□□□ -0.11
NR1H2P55055 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
NR1H2P55055 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H2P55055 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H2P55055 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NR1H2P55055 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NR1H2P55055 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H2P55055 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H2P55055 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H2P55055 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
NR1H2P55055 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.34□□□□□ -0.11
NR1H2P55055 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.34□□□□□ -0.11
NR1H2P55055 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H2P55055 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NR1H2P55055 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H2P55055 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H2P55055 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.34□□□□□ -0.11
NR1H2P55055 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.34□□□□□ -0.11
NR1H2P55055 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NR1H2P55055 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.34□□□□□ -0.11
NR1H2P55055 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H2P55055 TREML5P-201ENST00000421694 576 ntBASIC14.34□□□□□ -0.11
NR1H2P55055 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H2P55055 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NR1H2P55055 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.34□□□□□ -0.11
NR1H2P55055 TERF1P3-201ENST00000505638 1227 ntBASIC14.34□□□□□ -0.11
NR1H2P55055 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.34□□□□□ -0.11
NR1H2P55055 PRYP6-201ENST00000514804 343 ntBASIC14.34□□□□□ -0.11
NR1H2P55055 AC190387.1-201ENST00000551683 408 ntBASIC14.34□□□□□ -0.11
NR1H2P55055 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H2P55055 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.34□□□□□ -0.11
NR1H2P55055 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.34□□□□□ -0.11
NR1H2P55055 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.34□□□□□ -0.11
NR1H2P55055 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H2P55055 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H2P55055 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NR1H2P55055 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H2P55055 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H2P55055 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H2P55055 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NR1H2P55055 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H2P55055 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.34□□□□□ -0.11
NR1H2P55055 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H2P55055 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.34□□□□□ -0.11
NR1H2P55055 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NR1H2P55055 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NR1H2P55055 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
NR1H2P55055 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.34□□□□□ -0.11
NR1H2P55055 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H2P55055 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NR1H2P55055 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
NR1H2P55055 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H2P55055 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.34□□□□□ -0.11
NR1H2P55055 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NR1H2P55055 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NR1H2P55055 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NR1H2P55055 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.33□□□□□ -0.11
NR1H2P55055 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NR1H2P55055 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NR1H2P55055 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
NR1H2P55055 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NR1H2P55055 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
NR1H2P55055 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
NR1H2P55055 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.33□□□□□ -0.11
NR1H2P55055 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NR1H2P55055 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.33□□□□□ -0.11
NR1H2P55055 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
NR1H2P55055 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NR1H2P55055 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.33□□□□□ -0.12
NR1H2P55055 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.33□□□□□ -0.12
NR1H2P55055 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
NR1H2P55055 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
NR1H2P55055 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NR1H2P55055 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.33□□□□□ -0.12
NR1H2P55055 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NR1H2P55055 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H2P55055 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.33□□□□□ -0.12
NR1H2P55055 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H2P55055 HLA-H-201ENST00000383620 1096 ntBASIC14.33□□□□□ -0.12
NR1H2P55055 AC142381.1-201ENST00000426099 345 ntBASIC14.33□□□□□ -0.12
NR1H2P55055 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.33□□□□□ -0.12
NR1H2P55055 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H2P55055 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H2P55055 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H2P55055 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H2P55055 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.33□□□□□ -0.12
NR1H2P55055 RARRES2P9-201ENST00000565168 469 ntBASIC14.33□□□□□ -0.12
NR1H2P55055 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.33□□□□□ -0.12
NR1H2P55055 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
NR1H2P55055 AC018529.1-201ENST00000613063 361 ntBASIC14.33□□□□□ -0.12
NR1H2P55055 AL390754.1-201ENST00000619088 582 ntBASIC14.33□□□□□ -0.12
NR1H2P55055 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NR1H2P55055 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H2P55055 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H2P55055 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H2P55055 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.33□□□□□ -0.12
NR1H2P55055 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms