Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLCNKBP51801 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
CLCNKBP51801 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCNKBP51801 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCNKBP51801 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCNKBP51801 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCNKBP51801 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
CLCNKBP51801 LINC00528-201ENST00000600723 2160 ntBASIC15.92■□□□□ 0.14
CLCNKBP51801 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CLCNKBP51801 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLCNKBP51801 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.92■□□□□ 0.14
CLCNKBP51801 CYP46A4P-201ENST00000414953 267 ntBASIC15.92■□□□□ 0.14
CLCNKBP51801 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLCNKBP51801 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLCNKBP51801 CICP12-201ENST00000455801 843 ntBASIC15.92■□□□□ 0.14
CLCNKBP51801 RPL18P13-201ENST00000478088 569 ntBASIC15.92■□□□□ 0.14
CLCNKBP51801 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.92■□□□□ 0.14
CLCNKBP51801 AC022217.1-201ENST00000521069 738 ntBASIC15.92■□□□□ 0.14
CLCNKBP51801 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.92■□□□□ 0.14
CLCNKBP51801 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.92■□□□□ 0.14
CLCNKBP51801 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CLCNKBP51801 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.92■□□□□ 0.14
CLCNKBP51801 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.92■□□□□ 0.14
CLCNKBP51801 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.92■□□□□ 0.14
CLCNKBP51801 AC068587.8-201ENST00000641239 219 ntBASIC15.92■□□□□ 0.14
CLCNKBP51801 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.92■□□□□ 0.14
CLCNKBP51801 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.92■□□□□ 0.14
CLCNKBP51801 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCNKBP51801 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCNKBP51801 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLCNKBP51801 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCNKBP51801 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCNKBP51801 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCNKBP51801 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CLCNKBP51801 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCNKBP51801 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCNKBP51801 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.92■□□□□ 0.14
CLCNKBP51801 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CLCNKBP51801 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCNKBP51801 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCNKBP51801 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
CLCNKBP51801 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCNKBP51801 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.91■□□□□ 0.14
CLCNKBP51801 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.91■□□□□ 0.14
CLCNKBP51801 PUDPP3-201ENST00000445368 636 ntBASIC15.91■□□□□ 0.14
CLCNKBP51801 SPTLC1P5-201ENST00000450718 252 ntBASIC15.91■□□□□ 0.14
CLCNKBP51801 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.91■□□□□ 0.14
CLCNKBP51801 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCNKBP51801 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.91■□□□□ 0.14
CLCNKBP51801 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.91■□□□□ 0.14
CLCNKBP51801 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.91■□□□□ 0.14
CLCNKBP51801 AL645939.5-201ENST00000606834 243 ntBASIC15.91■□□□□ 0.14
CLCNKBP51801 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CLCNKBP51801 AC027601.3-201ENST00000622907 509 ntBASIC15.91■□□□□ 0.14
CLCNKBP51801 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.91■□□□□ 0.14
CLCNKBP51801 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.91■□□□□ 0.14
CLCNKBP51801 AC068587.10-201ENST00000641210 219 ntBASIC15.91■□□□□ 0.14
CLCNKBP51801 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.91■□□□□ 0.14
CLCNKBP51801 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
CLCNKBP51801 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.91■□□□□ 0.14
CLCNKBP51801 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CLCNKBP51801 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLCNKBP51801 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CLCNKBP51801 TUBBP5-203ENST00000508529 1334 ntBASIC15.91■□□□□ 0.14
CLCNKBP51801 AL008718.2-201ENST00000609206 1313 ntBASIC15.91■□□□□ 0.14
CLCNKBP51801 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLCNKBP51801 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLCNKBP51801 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCNKBP51801 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCNKBP51801 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCNKBP51801 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCNKBP51801 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCNKBP51801 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCNKBP51801 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCNKBP51801 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms