Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HCFC1P51610 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
HCFC1P51610 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
HCFC1P51610 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HCFC1P51610 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HCFC1P51610 AC006486.2-201ENST00000624246 2199 ntBASIC12.97□□□□□ -0.33
HCFC1P51610 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.97□□□□□ -0.33
HCFC1P51610 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HCFC1P51610 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HCFC1P51610 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HCFC1P51610 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HCFC1P51610 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HCFC1P51610 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
HCFC1P51610 ISCA2P1-201ENST00000425548 448 ntBASIC12.96□□□□□ -0.33
HCFC1P51610 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.96□□□□□ -0.33
HCFC1P51610 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
HCFC1P51610 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC12.96□□□□□ -0.33
HCFC1P51610 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.96□□□□□ -0.33
HCFC1P51610 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.96□□□□□ -0.33
HCFC1P51610 MIR4754-201ENST00000582477 89 ntBASIC12.96□□□□□ -0.33
HCFC1P51610 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.96□□□□□ -0.33
HCFC1P51610 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.96□□□□□ -0.33
HCFC1P51610 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.96□□□□□ -0.33
HCFC1P51610 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HCFC1P51610 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.96□□□□□ -0.33
HCFC1P51610 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
HCFC1P51610 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HCFC1P51610 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HCFC1P51610 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.96□□□□□ -0.33
HCFC1P51610 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HCFC1P51610 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HCFC1P51610 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.96□□□□□ -0.33
HCFC1P51610 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HCFC1P51610 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
HCFC1P51610 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HCFC1P51610 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HCFC1P51610 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.96□□□□□ -0.33
HCFC1P51610 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HCFC1P51610 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HCFC1P51610 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.96□□□□□ -0.33
HCFC1P51610 AC003102.2-201ENST00000589195 1469 ntBASIC12.96□□□□□ -0.33
HCFC1P51610 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HCFC1P51610 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HCFC1P51610 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.96□□□□□ -0.34
HCFC1P51610 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
HCFC1P51610 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
HCFC1P51610 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.96□□□□□ -0.34
HCFC1P51610 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC12.96□□□□□ -0.34
HCFC1P51610 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.96□□□□□ -0.34
HCFC1P51610 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.96□□□□□ -0.34
HCFC1P51610 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
HCFC1P51610 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.96□□□□□ -0.34
HCFC1P51610 AC015909.3-201ENST00000572855 1794 ntBASIC12.96□□□□□ -0.34
HCFC1P51610 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.96□□□□□ -0.34
HCFC1P51610 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
HCFC1P51610 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.96□□□□□ -0.34
HCFC1P51610 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HCFC1P51610 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HCFC1P51610 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HCFC1P51610 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.96□□□□□ -0.34
HCFC1P51610 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.96□□□□□ -0.34
HCFC1P51610 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.95□□□□□ -0.34
HCFC1P51610 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.95□□□□□ -0.34
HCFC1P51610 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.95□□□□□ -0.34
HCFC1P51610 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.95□□□□□ -0.34
HCFC1P51610 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.95□□□□□ -0.34
HCFC1P51610 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
HCFC1P51610 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.95□□□□□ -0.34
HCFC1P51610 RPS9P1-201ENST00000419943 583 ntBASIC12.95□□□□□ -0.34
HCFC1P51610 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 AC114501.1-201ENST00000445949 172 ntBASIC12.95□□□□□ -0.34
HCFC1P51610 AC136759.1-202ENST00000530858 2194 ntBASIC12.95□□□□□ -0.34
HCFC1P51610 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.95□□□□□ -0.34
HCFC1P51610 AC100827.2-201ENST00000563214 1194 ntBASIC12.95□□□□□ -0.34
HCFC1P51610 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
HCFC1P51610 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
HCFC1P51610 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
HCFC1P51610 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HCFC1P51610 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.95□□□□□ -0.34
HCFC1P51610 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 AC138035.3-201ENST00000622706 2791 ntBASIC12.95□□□□□ -0.34
HCFC1P51610 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 AC091951.1-201ENST00000512854 2465 ntBASIC12.95□□□□□ -0.34
HCFC1P51610 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
HCFC1P51610 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HCFC1P51610 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms