Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF144AP50876 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.05□□□□□ -0.16
RNF144AP50876 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
RNF144AP50876 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RNF144AP50876 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 LILRP1-201ENST00000444199 1370 ntBASIC14.05□□□□□ -0.16
RNF144AP50876 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RNF144AP50876 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
RNF144AP50876 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.05□□□□□ -0.16
RNF144AP50876 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.05□□□□□ -0.16
RNF144AP50876 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RNF144AP50876 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF144AP50876 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RNF144AP50876 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF144AP50876 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF144AP50876 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RNF144AP50876 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF144AP50876 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF144AP50876 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 RNU1-114P-201ENST00000365297 166 ntBASIC14.04□□□□□ -0.16
RNF144AP50876 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RNF144AP50876 DGCR5-201ENST00000399539 862 ntBASIC14.04□□□□□ -0.16
RNF144AP50876 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.04□□□□□ -0.16
RNF144AP50876 MEP1AP4-201ENST00000423244 1087 ntBASIC14.04□□□□□ -0.16
RNF144AP50876 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 HLA-K-203ENST00000430151 1046 ntBASIC14.04□□□□□ -0.16
RNF144AP50876 AL353779.1-201ENST00000434793 351 ntBASIC14.04□□□□□ -0.16
RNF144AP50876 FAM207CP-201ENST00000443486 507 ntBASIC14.04□□□□□ -0.16
RNF144AP50876 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.04□□□□□ -0.16
RNF144AP50876 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.04□□□□□ -0.16
RNF144AP50876 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.04□□□□□ -0.16
RNF144AP50876 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF144AP50876 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF144AP50876 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 AC124283.3-201ENST00000570869 594 ntBASIC14.04□□□□□ -0.16
RNF144AP50876 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF144AP50876 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF144AP50876 ACTG1P22-201ENST00000603793 1099 ntBASIC14.04□□□□□ -0.16
RNF144AP50876 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.04□□□□□ -0.16
RNF144AP50876 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.04□□□□□ -0.16
RNF144AP50876 WFDC1-204ENST00000613603 549 ntBASIC14.04□□□□□ -0.16
RNF144AP50876 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF144AP50876 AL360270.3-201ENST00000609118 1348 ntBASIC14.04□□□□□ -0.16
RNF144AP50876 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RNF144AP50876 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RNF144AP50876 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RNF144AP50876 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RNF144AP50876 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.04□□□□□ -0.16
RNF144AP50876 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RNF144AP50876 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.03□□□□□ -0.16
RNF144AP50876 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.03□□□□□ -0.16
RNF144AP50876 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.03□□□□□ -0.16
RNF144AP50876 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.03□□□□□ -0.16
RNF144AP50876 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RNF144AP50876 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.03□□□□□ -0.16
RNF144AP50876 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.03□□□□□ -0.16
RNF144AP50876 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms