Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LHX2P50458 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LHX2P50458 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LHX2P50458 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.35□□□□□ -0.27
LHX2P50458 LINC02228-204ENST00000642115 2962 ntBASIC13.35□□□□□ -0.27
LHX2P50458 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LHX2P50458 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LHX2P50458 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.34□□□□□ -0.27
LHX2P50458 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LHX2P50458 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LHX2P50458 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LHX2P50458 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.34□□□□□ -0.27
LHX2P50458 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 E2F3P2-201ENST00000447755 1422 ntBASIC13.34□□□□□ -0.27
LHX2P50458 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.34□□□□□ -0.27
LHX2P50458 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.34□□□□□ -0.27
LHX2P50458 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.34□□□□□ -0.27
LHX2P50458 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LHX2P50458 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.34□□□□□ -0.27
LHX2P50458 AC099548.2-209ENST00000480264 625 ntBASIC13.34□□□□□ -0.27
LHX2P50458 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.34□□□□□ -0.27
LHX2P50458 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.34□□□□□ -0.27
LHX2P50458 AP001258.2-201ENST00000529891 490 ntBASIC13.34□□□□□ -0.27
LHX2P50458 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.34□□□□□ -0.27
LHX2P50458 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 DUX4L46-201ENST00000566845 751 ntBASIC13.34□□□□□ -0.27
LHX2P50458 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 AC007663.3-201ENST00000609632 465 ntBASIC13.34□□□□□ -0.27
LHX2P50458 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.34□□□□□ -0.27
LHX2P50458 AC244093.1-201ENST00000610837 814 ntBASIC13.34□□□□□ -0.27
LHX2P50458 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.34□□□□□ -0.27
LHX2P50458 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LHX2P50458 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.34□□□□□ -0.27
LHX2P50458 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
LHX2P50458 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.34□□□□□ -0.27
LHX2P50458 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LHX2P50458 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
LHX2P50458 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.27
LHX2P50458 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.33□□□□□ -0.27
LHX2P50458 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LHX2P50458 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LHX2P50458 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LHX2P50458 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LHX2P50458 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.33□□□□□ -0.28
LHX2P50458 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LHX2P50458 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LHX2P50458 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LHX2P50458 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LHX2P50458 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LHX2P50458 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.33□□□□□ -0.28
LHX2P50458 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LHX2P50458 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LHX2P50458 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LHX2P50458 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
LHX2P50458 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LHX2P50458 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.33□□□□□ -0.28
LHX2P50458 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LHX2P50458 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.33□□□□□ -0.28
LHX2P50458 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LHX2P50458 GPAA1P2-201ENST00000417923 928 ntBASIC13.33□□□□□ -0.28
LHX2P50458 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.33□□□□□ -0.28
LHX2P50458 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.33□□□□□ -0.28
LHX2P50458 KRT8P13-201ENST00000463294 1010 ntBASIC13.33□□□□□ -0.28
LHX2P50458 AC126915.1-201ENST00000522847 1038 ntBASIC13.33□□□□□ -0.28
LHX2P50458 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.33□□□□□ -0.28
LHX2P50458 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LHX2P50458 AL162426.1-201ENST00000624141 743 ntBASIC13.33□□□□□ -0.28
LHX2P50458 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.33□□□□□ -0.28
LHX2P50458 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.33□□□□□ -0.28
LHX2P50458 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LHX2P50458 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
LHX2P50458 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LHX2P50458 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LHX2P50458 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LHX2P50458 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
LHX2P50458 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LHX2P50458 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
LHX2P50458 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.33□□□□□ -0.28
LHX2P50458 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
LHX2P50458 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.33□□□□□ -0.28
LHX2P50458 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LHX2P50458 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms