Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC9A3P48764 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.86□□□□□ -0.19
SLC9A3P48764 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC9A3P48764 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC9A3P48764 AC092135.3-201ENST00000624151 1846 ntBASIC13.86□□□□□ -0.19
SLC9A3P48764 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC9A3P48764 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC9A3P48764 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC9A3P48764 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC9A3P48764 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC9A3P48764 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.86□□□□□ -0.19
SLC9A3P48764 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
SLC9A3P48764 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.86□□□□□ -0.19
SLC9A3P48764 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SLC9A3P48764 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC9A3P48764 FAM86GP-201ENST00000448322 971 ntBASIC13.86□□□□□ -0.19
SLC9A3P48764 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.86□□□□□ -0.19
SLC9A3P48764 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC9A3P48764 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SLC9A3P48764 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC9A3P48764 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC9A3P48764 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC9A3P48764 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC9A3P48764 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC9A3P48764 AC100757.3-201ENST00000622361 1406 ntBASIC13.86□□□□□ -0.19
SLC9A3P48764 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SLC9A3P48764 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC9A3P48764 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC9A3P48764 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC9A3P48764 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC9A3P48764 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
SLC9A3P48764 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC9A3P48764 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC9A3P48764 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLC9A3P48764 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
SLC9A3P48764 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.86□□□□□ -0.19
SLC9A3P48764 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLC9A3P48764 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.86□□□□□ -0.19
SLC9A3P48764 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SLC9A3P48764 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC9A3P48764 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC9A3P48764 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC9A3P48764 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC9A3P48764 LILRP1-201ENST00000444199 1370 ntBASIC13.85□□□□□ -0.19
SLC9A3P48764 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC9A3P48764 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC9A3P48764 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC9A3P48764 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SLC9A3P48764 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC9A3P48764 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC9A3P48764 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
SLC9A3P48764 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC9A3P48764 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
SLC9A3P48764 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC9A3P48764 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SLC9A3P48764 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC9A3P48764 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.85□□□□□ -0.19
SLC9A3P48764 AC092580.3-201ENST00000430932 139 ntBASIC13.85□□□□□ -0.19
SLC9A3P48764 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC9A3P48764 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.85□□□□□ -0.19
SLC9A3P48764 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC9A3P48764 AC097493.3-201ENST00000509725 367 ntBASIC13.85□□□□□ -0.19
SLC9A3P48764 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.85□□□□□ -0.19
SLC9A3P48764 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.85□□□□□ -0.19
SLC9A3P48764 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC9A3P48764 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC9A3P48764 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC9A3P48764 AL691403.2-201ENST00000618460 490 ntBASIC13.85□□□□□ -0.19
SLC9A3P48764 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC9A3P48764 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC9A3P48764 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC9A3P48764 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC9A3P48764 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC9A3P48764 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC9A3P48764 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC9A3P48764 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC9A3P48764 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC9A3P48764 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC9A3P48764 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC9A3P48764 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SLC9A3P48764 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC9A3P48764 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC9A3P48764 AC113367.3-201ENST00000508316 1912 ntBASIC13.84□□□□□ -0.19
SLC9A3P48764 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SLC9A3P48764 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC9A3P48764 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.84□□□□□ -0.19
SLC9A3P48764 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms