Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CSNK1A1P48729 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.4□□□□□ -0.26
CSNK1A1P48729 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.4□□□□□ -0.27
CSNK1A1P48729 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CSNK1A1P48729 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CSNK1A1P48729 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CSNK1A1P48729 AC018442.1-201ENST00000421439 2061 ntBASIC13.4□□□□□ -0.27
CSNK1A1P48729 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 AC134312.5-201ENST00000568031 1313 ntBASIC13.39□□□□□ -0.27
CSNK1A1P48729 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 AC138969.2-201ENST00000532739 9932 ntBASIC13.39□□□□□ -0.27
CSNK1A1P48729 AC023090.2-201ENST00000625182 2110 ntBASIC13.39□□□□□ -0.27
CSNK1A1P48729 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 BAATP1-201ENST00000412284 1225 ntBASIC13.39□□□□□ -0.27
CSNK1A1P48729 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 EIF3FP3-201ENST00000434851 1086 ntBASIC13.39□□□□□ -0.27
CSNK1A1P48729 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 AC012441.1-201ENST00000446669 685 ntBASIC13.39□□□□□ -0.27
CSNK1A1P48729 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 AC068587.3-201ENST00000526613 355 ntBASIC13.39□□□□□ -0.27
CSNK1A1P48729 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 MIR5189-201ENST00000577370 114 ntBASIC13.39□□□□□ -0.27
CSNK1A1P48729 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 AC018665.1-201ENST00000622927 1362 ntBASIC13.39□□□□□ -0.27
CSNK1A1P48729 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms