Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GABRA4P48169 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.15□□□□□ -0.14
GABRA4P48169 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.15□□□□□ -0.14
GABRA4P48169 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GABRA4P48169 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABRA4P48169 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.15□□□□□ -0.14
GABRA4P48169 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABRA4P48169 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.15□□□□□ -0.14
GABRA4P48169 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
GABRA4P48169 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABRA4P48169 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GABRA4P48169 KRT8P29-201ENST00000420409 1371 ntBASIC14.15□□□□□ -0.14
GABRA4P48169 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABRA4P48169 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GABRA4P48169 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
GABRA4P48169 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.15□□□□□ -0.14
GABRA4P48169 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
GABRA4P48169 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.15□□□□□ -0.14
GABRA4P48169 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.15□□□□□ -0.14
GABRA4P48169 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.15□□□□□ -0.14
GABRA4P48169 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.15□□□□□ -0.14
GABRA4P48169 SERPINA13P-202ENST00000478994 924 ntBASIC14.15□□□□□ -0.14
GABRA4P48169 AC091804.1-201ENST00000486888 567 ntBASIC14.15□□□□□ -0.14
GABRA4P48169 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.15□□□□□ -0.14
GABRA4P48169 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.15□□□□□ -0.14
GABRA4P48169 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GABRA4P48169 AC005324.6-201ENST00000587972 613 ntBASIC14.15□□□□□ -0.14
GABRA4P48169 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABRA4P48169 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.15□□□□□ -0.14
GABRA4P48169 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
GABRA4P48169 AC132192.2-201ENST00000596206 1147 ntBASIC14.15□□□□□ -0.14
GABRA4P48169 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABRA4P48169 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
GABRA4P48169 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GABRA4P48169 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.15□□□□□ -0.14
GABRA4P48169 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
GABRA4P48169 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
GABRA4P48169 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GABRA4P48169 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABRA4P48169 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABRA4P48169 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
GABRA4P48169 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GABRA4P48169 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABRA4P48169 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
GABRA4P48169 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
GABRA4P48169 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
GABRA4P48169 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
GABRA4P48169 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GABRA4P48169 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.14□□□□□ -0.15
GABRA4P48169 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
GABRA4P48169 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABRA4P48169 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABRA4P48169 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
GABRA4P48169 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
GABRA4P48169 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.14□□□□□ -0.15
GABRA4P48169 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABRA4P48169 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABRA4P48169 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABRA4P48169 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
GABRA4P48169 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.14□□□□□ -0.15
GABRA4P48169 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GABRA4P48169 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.14□□□□□ -0.15
GABRA4P48169 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABRA4P48169 PUDPP3-201ENST00000445368 636 ntBASIC14.14□□□□□ -0.15
GABRA4P48169 CICP12-201ENST00000455801 843 ntBASIC14.14□□□□□ -0.15
GABRA4P48169 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABRA4P48169 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.14□□□□□ -0.15
GABRA4P48169 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
GABRA4P48169 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.14□□□□□ -0.15
GABRA4P48169 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
GABRA4P48169 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GABRA4P48169 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.14□□□□□ -0.15
GABRA4P48169 BNIP3P13-201ENST00000599968 566 ntBASIC14.14□□□□□ -0.15
GABRA4P48169 AL451050.2-201ENST00000606967 682 ntBASIC14.14□□□□□ -0.15
GABRA4P48169 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GABRA4P48169 AC013726.1-201ENST00000563747 2285 ntBASIC14.14□□□□□ -0.15
GABRA4P48169 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABRA4P48169 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABRA4P48169 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.14□□□□□ -0.15
GABRA4P48169 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
GABRA4P48169 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GABRA4P48169 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABRA4P48169 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GABRA4P48169 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABRA4P48169 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GABRA4P48169 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GABRA4P48169 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GABRA4P48169 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
GABRA4P48169 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.13□□□□□ -0.15
GABRA4P48169 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
GABRA4P48169 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.13□□□□□ -0.15
GABRA4P48169 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
GABRA4P48169 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms