Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC16.3■□□□□ 0.2
HTTP42858 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC16.3■□□□□ 0.2
HTTP42858 BX322534.1-201ENST00000635574 241 ntBASIC16.3■□□□□ 0.2
HTTP42858 AC215524.1-201ENST00000635696 241 ntBASIC16.3■□□□□ 0.2
HTTP42858 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
HTTP42858 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HTTP42858 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.29■□□□□ 0.2
HTTP42858 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTTP42858 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTTP42858 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTTP42858 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC16.29■□□□□ 0.2
HTTP42858 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTTP42858 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HTTP42858 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTTP42858 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTTP42858 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.29■□□□□ 0.2
HTTP42858 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
HTTP42858 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTTP42858 RN7SL530P-201ENST00000485097 298 ntBASIC16.29■□□□□ 0.2
HTTP42858 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC16.29■□□□□ 0.2
HTTP42858 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.29■□□□□ 0.2
HTTP42858 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.29■□□□□ 0.2
HTTP42858 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.29■□□□□ 0.2
HTTP42858 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTTP42858 AC006116.2-201ENST00000589958 988 ntBASIC16.29■□□□□ 0.2
HTTP42858 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC16.29■□□□□ 0.2
HTTP42858 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HTTP42858 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.29■□□□□ 0.2
HTTP42858 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTTP42858 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTTP42858 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.29■□□□□ 0.2
HTTP42858 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HTTP42858 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.29■□□□□ 0.2
HTTP42858 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTTP42858 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HTTP42858 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.29■□□□□ 0.2
HTTP42858 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTTP42858 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTTP42858 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HTTP42858 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC16.29■□□□□ 0.2
HTTP42858 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC16.29■□□□□ 0.2
HTTP42858 SIGLEC22P-201ENST00000599104 714 ntBASIC16.29■□□□□ 0.2
HTTP42858 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC16.29■□□□□ 0.2
HTTP42858 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.29■□□□□ 0.2
HTTP42858 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.29■□□□□ 0.2
HTTP42858 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTTP42858 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HTTP42858 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HTTP42858 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.28■□□□□ 0.2
HTTP42858 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.28■□□□□ 0.2
HTTP42858 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTTP42858 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.28■□□□□ 0.2
HTTP42858 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
HTTP42858 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HTTP42858 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTTP42858 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HTTP42858 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC16.28■□□□□ 0.2
HTTP42858 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC16.28■□□□□ 0.2
HTTP42858 PHF23-213ENST00000613632 850 ntTSL 5 BASIC16.28■□□□□ 0.2
HTTP42858 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC16.28■□□□□ 0.2
HTTP42858 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC16.28■□□□□ 0.2
HTTP42858 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTTP42858 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.28■□□□□ 0.2
HTTP42858 KHSRPP1-201ENST00000427983 1768 ntBASIC16.28■□□□□ 0.2
HTTP42858 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC16.28■□□□□ 0.2
HTTP42858 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTTP42858 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HTTP42858 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HTTP42858 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTTP42858 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HTTP42858 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.28■□□□□ 0.2
HTTP42858 FAM197Y6-201ENST00000420524 766 ntBASIC16.28■□□□□ 0.2
HTTP42858 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC16.28■□□□□ 0.2
HTTP42858 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTTP42858 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.28■□□□□ 0.2
HTTP42858 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC16.28■□□□□ 0.2
HTTP42858 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.28■□□□□ 0.2
HTTP42858 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HTTP42858 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HTTP42858 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.28■□□□□ 0.2
HTTP42858 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTTP42858 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTTP42858 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HTTP42858 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTTP42858 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HTTP42858 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC16.28■□□□□ 0.2
HTTP42858 RN7SL173P-201ENST00000461853 292 ntBASIC16.28■□□□□ 0.2
HTTP42858 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTTP42858 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HTTP42858 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.28■□□□□ 0.2
HTTP42858 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HTTP42858 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HTTP42858 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
HTTP42858 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HTTP42858 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.27■□□□□ 0.2
HTTP42858 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HTTP42858 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HTTP42858 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HTTP42858 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.27■□□□□ 0.2
HTTP42858 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms