Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 FAM8A4P-201ENST00000435433 1213 ntBASIC13.8□□□□□ -0.2
RFC3P40938 MTX1P1-201ENST00000440904 838 ntBASIC13.8□□□□□ -0.2
RFC3P40938 AC245100.3-201ENST00000441281 285 ntBASIC13.8□□□□□ -0.2
RFC3P40938 AC104306.2-201ENST00000451877 341 ntBASIC13.8□□□□□ -0.2
RFC3P40938 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RFC3P40938 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.8□□□□□ -0.2
RFC3P40938 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.8□□□□□ -0.2
RFC3P40938 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.8□□□□□ -0.2
RFC3P40938 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFC3P40938 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RFC3P40938 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.8□□□□□ -0.2
RFC3P40938 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.8□□□□□ -0.2
RFC3P40938 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.8□□□□□ -0.2
RFC3P40938 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
RFC3P40938 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFC3P40938 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.8□□□□□ -0.2
RFC3P40938 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFC3P40938 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RFC3P40938 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.8□□□□□ -0.2
RFC3P40938 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.8□□□□□ -0.2
RFC3P40938 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFC3P40938 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFC3P40938 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
RFC3P40938 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.8□□□□□ -0.2
RFC3P40938 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RFC3P40938 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RFC3P40938 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFC3P40938 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.8□□□□□ -0.2
RFC3P40938 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RFC3P40938 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RFC3P40938 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.8□□□□□ -0.2
RFC3P40938 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RFC3P40938 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RFC3P40938 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.79□□□□□ -0.2
RFC3P40938 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RFC3P40938 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 AC020658.6-201ENST00000623564 1870 ntBASIC13.79□□□□□ -0.2
RFC3P40938 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.79□□□□□ -0.2
RFC3P40938 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.79□□□□□ -0.2
RFC3P40938 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.79□□□□□ -0.2
RFC3P40938 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.79□□□□□ -0.2
RFC3P40938 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 CNN2P10-201ENST00000443067 918 ntBASIC13.79□□□□□ -0.2
RFC3P40938 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.79□□□□□ -0.2
RFC3P40938 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.79□□□□□ -0.2
RFC3P40938 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.79□□□□□ -0.2
RFC3P40938 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.79□□□□□ -0.2
RFC3P40938 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.79□□□□□ -0.2
RFC3P40938 REXO1L4P-201ENST00000605109 1937 ntBASIC13.79□□□□□ -0.2
RFC3P40938 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
RFC3P40938 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.79□□□□□ -0.2
RFC3P40938 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
RFC3P40938 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RFC3P40938 AC020907.1-201ENST00000616460 1350 ntBASIC13.79□□□□□ -0.2
RFC3P40938 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 KRT8P4-201ENST00000509735 1454 ntBASIC13.79□□□□□ -0.2
RFC3P40938 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RFC3P40938 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 C18orf15-201ENST00000623680 2534 ntBASIC13.79□□□□□ -0.2
RFC3P40938 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RFC3P40938 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RFC3P40938 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 AL137783.1-201ENST00000623494 1896 ntBASIC13.78□□□□□ -0.2
RFC3P40938 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RFC3P40938 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.78□□□□□ -0.2
RFC3P40938 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RFC3P40938 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.78□□□□□ -0.2
RFC3P40938 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RFC3P40938 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.78□□□□□ -0.2
RFC3P40938 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.78□□□□□ -0.2
RFC3P40938 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms