Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
GRIK1P39086 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.81■□□□□ 0.12
GRIK1P39086 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.81■□□□□ 0.12
GRIK1P39086 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.81■□□□□ 0.12
GRIK1P39086 MIR4683-201ENST00000579659 81 ntBASIC15.81■□□□□ 0.12
GRIK1P39086 AC138696.2-201ENST00000607376 223 ntBASIC15.81■□□□□ 0.12
GRIK1P39086 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GRIK1P39086 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.81■□□□□ 0.12
GRIK1P39086 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.81■□□□□ 0.12
GRIK1P39086 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
GRIK1P39086 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GRIK1P39086 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.8■□□□□ 0.12
GRIK1P39086 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GRIK1P39086 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
GRIK1P39086 ACE3P-201ENST00000423435 1973 ntBASIC15.8■□□□□ 0.12
GRIK1P39086 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GRIK1P39086 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
GRIK1P39086 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GRIK1P39086 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GRIK1P39086 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
GRIK1P39086 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GRIK1P39086 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GRIK1P39086 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GRIK1P39086 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.8■□□□□ 0.12
GRIK1P39086 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GRIK1P39086 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.8■□□□□ 0.12
GRIK1P39086 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GRIK1P39086 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GRIK1P39086 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GRIK1P39086 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
GRIK1P39086 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.8■□□□□ 0.12
GRIK1P39086 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.8■□□□□ 0.12
GRIK1P39086 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.8■□□□□ 0.12
GRIK1P39086 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.8■□□□□ 0.12
GRIK1P39086 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.8■□□□□ 0.12
GRIK1P39086 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GRIK1P39086 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.8■□□□□ 0.12
GRIK1P39086 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.8■□□□□ 0.12
GRIK1P39086 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GRIK1P39086 AC104982.3-201ENST00000581995 514 ntBASIC15.8■□□□□ 0.12
GRIK1P39086 AC243960.2-201ENST00000600996 747 ntBASIC15.8■□□□□ 0.12
GRIK1P39086 AL096828.3-201ENST00000615354 462 ntBASIC15.8■□□□□ 0.12
GRIK1P39086 GPR182-203ENST00000622922 591 ntBASIC15.8■□□□□ 0.12
GRIK1P39086 AP001002.3-201ENST00000623482 206 ntBASIC15.8■□□□□ 0.12
GRIK1P39086 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GRIK1P39086 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.8■□□□□ 0.12
GRIK1P39086 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
GRIK1P39086 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
GRIK1P39086 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GRIK1P39086 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GRIK1P39086 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
GRIK1P39086 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GRIK1P39086 SALL4P5-201ENST00000419001 1760 ntBASIC15.8■□□□□ 0.12
GRIK1P39086 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GRIK1P39086 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.8■□□□□ 0.12
GRIK1P39086 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GRIK1P39086 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GRIK1P39086 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
GRIK1P39086 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GRIK1P39086 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
GRIK1P39086 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
GRIK1P39086 AC009093.2-202ENST00000620513 2079 ntBASIC15.79■□□□□ 0.12
GRIK1P39086 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GRIK1P39086 AL138725.1-201ENST00000407347 1314 ntBASIC15.79■□□□□ 0.12
GRIK1P39086 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.79■□□□□ 0.12
GRIK1P39086 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GRIK1P39086 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GRIK1P39086 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
GRIK1P39086 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GRIK1P39086 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GRIK1P39086 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GRIK1P39086 RN7SKP230-201ENST00000365642 335 ntBASIC15.79■□□□□ 0.12
GRIK1P39086 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.79■□□□□ 0.12
GRIK1P39086 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GRIK1P39086 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
GRIK1P39086 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.79■□□□□ 0.12
GRIK1P39086 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.79■□□□□ 0.12
GRIK1P39086 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.79■□□□□ 0.12
GRIK1P39086 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.79■□□□□ 0.12
GRIK1P39086 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
GRIK1P39086 AC005695.3-201ENST00000614522 232 ntBASIC15.79■□□□□ 0.12
GRIK1P39086 AC002472.3-201ENST00000640124 621 ntBASIC15.79■□□□□ 0.12
GRIK1P39086 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.79■□□□□ 0.12
GRIK1P39086 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
GRIK1P39086 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.79■□□□□ 0.12
GRIK1P39086 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.79■□□□□ 0.12
GRIK1P39086 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GRIK1P39086 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
GRIK1P39086 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
GRIK1P39086 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
GRIK1P39086 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GRIK1P39086 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GRIK1P39086 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GRIK1P39086 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GRIK1P39086 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms