Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KRT9P35527 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT9P35527 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KRT9P35527 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.48■□□□□ 0.23
KRT9P35527 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT9P35527 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
KRT9P35527 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT9P35527 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
KRT9P35527 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
KRT9P35527 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT9P35527 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT9P35527 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.47■□□□□ 0.23
KRT9P35527 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT9P35527 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT9P35527 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT9P35527 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT9P35527 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT9P35527 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT9P35527 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.47■□□□□ 0.23
KRT9P35527 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.47■□□□□ 0.23
KRT9P35527 TPRX2P-201ENST00000535362 881 ntBASIC16.47■□□□□ 0.23
KRT9P35527 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
KRT9P35527 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT9P35527 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT9P35527 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT9P35527 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT9P35527 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT9P35527 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT9P35527 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT9P35527 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT9P35527 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT9P35527 CLK3P2-201ENST00000427566 1453 ntBASIC16.47■□□□□ 0.23
KRT9P35527 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
KRT9P35527 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT9P35527 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
KRT9P35527 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.46■□□□□ 0.23
KRT9P35527 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT9P35527 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT9P35527 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 SPDYE19P-201ENST00000338590 713 ntBASIC16.46■□□□□ 0.23
KRT9P35527 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT9P35527 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.46■□□□□ 0.23
KRT9P35527 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.46■□□□□ 0.23
KRT9P35527 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.46■□□□□ 0.23
KRT9P35527 RARRES2P5-201ENST00000564013 466 ntBASIC16.46■□□□□ 0.23
KRT9P35527 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT9P35527 AC036164.1-201ENST00000570544 333 ntBASIC16.46■□□□□ 0.23
KRT9P35527 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.46■□□□□ 0.23
KRT9P35527 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT9P35527 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT9P35527 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 AC023090.2-201ENST00000625182 2110 ntBASIC16.46■□□□□ 0.23
KRT9P35527 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT9P35527 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
KRT9P35527 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.22
KRT9P35527 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
KRT9P35527 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT9P35527 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT9P35527 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT9P35527 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
KRT9P35527 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT9P35527 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT9P35527 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT9P35527 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
KRT9P35527 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
KRT9P35527 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
KRT9P35527 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT9P35527 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT9P35527 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT9P35527 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT9P35527 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT9P35527 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT9P35527 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT9P35527 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT9P35527 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT9P35527 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.45■□□□□ 0.22
KRT9P35527 MEP1AP4-201ENST00000423244 1087 ntBASIC16.45■□□□□ 0.22
KRT9P35527 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms