Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
CKS2P33552 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC11.1□□□□□ -0.63
CKS2P33552 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC11.1□□□□□ -0.63
CKS2P33552 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
CKS2P33552 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.1□□□□□ -0.63
CKS2P33552 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.1□□□□□ -0.63
CKS2P33552 AKR1C7P-201ENST00000305623 895 ntBASIC11.1□□□□□ -0.63
CKS2P33552 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.1□□□□□ -0.63
CKS2P33552 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.1□□□□□ -0.63
CKS2P33552 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC11.1□□□□□ -0.63
CKS2P33552 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.1□□□□□ -0.63
CKS2P33552 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.1□□□□□ -0.63
CKS2P33552 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.1□□□□□ -0.63
CKS2P33552 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.1□□□□□ -0.63
CKS2P33552 AC012640.2-201ENST00000561606 901 ntBASIC11.1□□□□□ -0.63
CKS2P33552 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.1□□□□□ -0.63
CKS2P33552 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
CKS2P33552 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 MVK-214ENST00000629016 1591 ntTSL 5 BASIC11.1□□□□□ -0.63
CKS2P33552 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
CKS2P33552 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC11.1□□□□□ -0.63
CKS2P33552 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
CKS2P33552 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
CKS2P33552 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
CKS2P33552 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
CKS2P33552 AC090114.2-201ENST00000608477 7054 ntBASIC11.1□□□□□ -0.63
CKS2P33552 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CKS2P33552 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC11.1□□□□□ -0.63
CKS2P33552 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.09□□□□□ -0.63
CKS2P33552 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
CKS2P33552 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC11.09□□□□□ -0.63
CKS2P33552 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.09□□□□□ -0.63
CKS2P33552 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC11.09□□□□□ -0.63
CKS2P33552 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
CKS2P33552 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11.09□□□□□ -0.63
CKS2P33552 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.09□□□□□ -0.63
CKS2P33552 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 FAM220BP-201ENST00000377689 816 ntBASIC11.09□□□□□ -0.63
CKS2P33552 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.09□□□□□ -0.63
CKS2P33552 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.09□□□□□ -0.63
CKS2P33552 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
CKS2P33552 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC11.09□□□□□ -0.63
CKS2P33552 UNC93B6-202ENST00000528242 690 ntBASIC11.09□□□□□ -0.63
CKS2P33552 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
CKS2P33552 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC11.09□□□□□ -0.63
CKS2P33552 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC11.09□□□□□ -0.63
CKS2P33552 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC11.09□□□□□ -0.63
CKS2P33552 TP73-AS1-207ENST00000624167 988 ntBASIC11.09□□□□□ -0.63
CKS2P33552 AC066615.1-201ENST00000640911 628 ntBASIC11.09□□□□□ -0.63
CKS2P33552 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.09□□□□□ -0.63
CKS2P33552 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
CKS2P33552 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
CKS2P33552 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms