Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40LGP29965 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40LGP29965 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.37□□□□□ -0.27
CD40LGP29965 AC073439.1-201ENST00000624121 1774 ntBASIC13.37□□□□□ -0.27
CD40LGP29965 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CD40LGP29965 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 AC006504.4-201ENST00000592118 1568 ntBASIC13.37□□□□□ -0.27
CD40LGP29965 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.37□□□□□ -0.27
CD40LGP29965 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.37□□□□□ -0.27
CD40LGP29965 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CD40LGP29965 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 MRPL20P1-201ENST00000400819 433 ntBASIC13.37□□□□□ -0.27
CD40LGP29965 ELK2BP-201ENST00000415014 1224 ntBASIC13.37□□□□□ -0.27
CD40LGP29965 KRT18P27-201ENST00000427733 1299 ntBASIC13.37□□□□□ -0.27
CD40LGP29965 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.37□□□□□ -0.27
CD40LGP29965 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.37□□□□□ -0.27
CD40LGP29965 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.37□□□□□ -0.27
CD40LGP29965 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
CD40LGP29965 AC008667.4-201ENST00000607370 168 ntBASIC13.37□□□□□ -0.27
CD40LGP29965 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.37□□□□□ -0.27
CD40LGP29965 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CD40LGP29965 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CD40LGP29965 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CD40LGP29965 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 AL031595.1-201ENST00000623969 4709 ntBASIC13.37□□□□□ -0.27
CD40LGP29965 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
CD40LGP29965 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CD40LGP29965 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.37□□□□□ -0.27
CD40LGP29965 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 PMS2P7-201ENST00000506558 1336 ntBASIC13.37□□□□□ -0.27
CD40LGP29965 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CD40LGP29965 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CD40LGP29965 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.36□□□□□ -0.27
CD40LGP29965 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD40LGP29965 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD40LGP29965 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.36□□□□□ -0.27
CD40LGP29965 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CD40LGP29965 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.36□□□□□ -0.27
CD40LGP29965 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD40LGP29965 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.36□□□□□ -0.27
CD40LGP29965 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CD40LGP29965 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.36□□□□□ -0.27
CD40LGP29965 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD40LGP29965 ZNF259P1-201ENST00000407656 1365 ntBASIC13.36□□□□□ -0.27
CD40LGP29965 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CD40LGP29965 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD40LGP29965 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD40LGP29965 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CD40LGP29965 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD40LGP29965 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD40LGP29965 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD40LGP29965 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD40LGP29965 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD40LGP29965 MRPL3P1-201ENST00000400109 1033 ntBASIC13.36□□□□□ -0.27
CD40LGP29965 HNRNPDP1-201ENST00000439535 754 ntBASIC13.36□□□□□ -0.27
CD40LGP29965 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD40LGP29965 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
CD40LGP29965 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.36□□□□□ -0.27
CD40LGP29965 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.36□□□□□ -0.27
CD40LGP29965 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.36□□□□□ -0.27
CD40LGP29965 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD40LGP29965 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.36□□□□□ -0.27
CD40LGP29965 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.36□□□□□ -0.27
CD40LGP29965 SLC25A6P4-201ENST00000586535 553 ntBASIC13.36□□□□□ -0.27
CD40LGP29965 AL121894.2-201ENST00000602977 491 ntBASIC13.36□□□□□ -0.27
CD40LGP29965 AC097359.3-201ENST00000603982 1210 ntBASIC13.36□□□□□ -0.27
CD40LGP29965 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CD40LGP29965 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.36□□□□□ -0.27
CD40LGP29965 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CD40LGP29965 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.36□□□□□ -0.27
CD40LGP29965 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.36□□□□□ -0.27
CD40LGP29965 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms