Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTGFP29279 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CTGFP29279 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTGFP29279 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CTGFP29279 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTGFP29279 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTGFP29279 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTGFP29279 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC16.49■□□□□ 0.23
CTGFP29279 KRT18P46-201ENST00000435568 1279 ntBASIC16.49■□□□□ 0.23
CTGFP29279 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.49■□□□□ 0.23
CTGFP29279 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC16.49■□□□□ 0.23
CTGFP29279 GDNF-207ENST00000515058 764 ntTSL 5 BASIC16.49■□□□□ 0.23
CTGFP29279 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC16.49■□□□□ 0.23
CTGFP29279 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC16.49■□□□□ 0.23
CTGFP29279 RN7SL665P-201ENST00000578793 300 ntBASIC16.49■□□□□ 0.23
CTGFP29279 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC16.49■□□□□ 0.23
CTGFP29279 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTGFP29279 AL627230.2-201ENST00000613254 655 ntBASIC16.49■□□□□ 0.23
CTGFP29279 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTGFP29279 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTGFP29279 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTGFP29279 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTGFP29279 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTGFP29279 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.49■□□□□ 0.23
CTGFP29279 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CTGFP29279 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTGFP29279 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTGFP29279 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.49■□□□□ 0.23
CTGFP29279 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.49■□□□□ 0.23
CTGFP29279 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTGFP29279 LTB4R2-202ENST00000528054 3092 ntBASIC16.49■□□□□ 0.23
CTGFP29279 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTGFP29279 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.48■□□□□ 0.23
CTGFP29279 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.48■□□□□ 0.23
CTGFP29279 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.48■□□□□ 0.23
CTGFP29279 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC16.48■□□□□ 0.23
CTGFP29279 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTGFP29279 AC112693.3-201ENST00000624819 1983 ntBASIC16.48■□□□□ 0.23
CTGFP29279 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTGFP29279 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTGFP29279 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CTGFP29279 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC16.48■□□□□ 0.23
CTGFP29279 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC16.48■□□□□ 0.23
CTGFP29279 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC16.48■□□□□ 0.23
CTGFP29279 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC16.48■□□□□ 0.23
CTGFP29279 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.48■□□□□ 0.23
CTGFP29279 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.48■□□□□ 0.23
CTGFP29279 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC16.48■□□□□ 0.23
CTGFP29279 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CTGFP29279 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC16.48■□□□□ 0.23
CTGFP29279 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC16.48■□□□□ 0.23
CTGFP29279 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CTGFP29279 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.48■□□□□ 0.23
CTGFP29279 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CTGFP29279 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.48■□□□□ 0.23
CTGFP29279 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.48■□□□□ 0.23
CTGFP29279 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CTGFP29279 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.48■□□□□ 0.23
CTGFP29279 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.48■□□□□ 0.23
CTGFP29279 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTGFP29279 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.48■□□□□ 0.23
CTGFP29279 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTGFP29279 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.48■□□□□ 0.23
CTGFP29279 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.48■□□□□ 0.23
CTGFP29279 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CTGFP29279 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTGFP29279 LINC01101-201ENST00000622953 1884 ntBASIC16.48■□□□□ 0.23
CTGFP29279 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTGFP29279 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.48■□□□□ 0.23
CTGFP29279 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTGFP29279 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
CTGFP29279 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTGFP29279 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTGFP29279 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTGFP29279 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC16.47■□□□□ 0.23
CTGFP29279 AC011270.2-201ENST00000624293 2550 ntBASIC16.47■□□□□ 0.23
CTGFP29279 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTGFP29279 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CTGFP29279 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTGFP29279 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.47■□□□□ 0.23
CTGFP29279 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.47■□□□□ 0.23
CTGFP29279 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CTGFP29279 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTGFP29279 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTGFP29279 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTGFP29279 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CTGFP29279 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CTGFP29279 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.47■□□□□ 0.23
CTGFP29279 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC16.47■□□□□ 0.23
CTGFP29279 GNG10P1-201ENST00000452289 199 ntBASIC16.47■□□□□ 0.23
CTGFP29279 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC16.47■□□□□ 0.23
CTGFP29279 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.47■□□□□ 0.23
CTGFP29279 RN7SL582P-201ENST00000491078 279 ntBASIC16.47■□□□□ 0.23
CTGFP29279 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.47■□□□□ 0.23
CTGFP29279 SRP14-204ENST00000558720 780 ntTSL 2 BASIC16.47■□□□□ 0.23
CTGFP29279 USB1-205ENST00000561743 1135 ntTSL 3 BASIC16.47■□□□□ 0.23
CTGFP29279 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.47■□□□□ 0.23
CTGFP29279 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.47■□□□□ 0.23
CTGFP29279 SIGLEC22P-201ENST00000599104 714 ntBASIC16.47■□□□□ 0.23
CTGFP29279 LINC00244-201ENST00000625073 613 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms