Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF1P27539 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF1P27539 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF1P27539 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF1P27539 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
GDF1P27539 AL136309.1-201ENST00000403917 691 ntBASIC13.61□□□□□ -0.23
GDF1P27539 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.61□□□□□ -0.23
GDF1P27539 AC007969.1-201ENST00000433675 447 ntBASIC13.61□□□□□ -0.23
GDF1P27539 AC108725.1-201ENST00000495472 409 ntBASIC13.61□□□□□ -0.23
GDF1P27539 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GDF1P27539 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
GDF1P27539 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.61□□□□□ -0.23
GDF1P27539 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.61□□□□□ -0.23
GDF1P27539 AP003171.2-201ENST00000528208 925 ntBASIC13.61□□□□□ -0.23
GDF1P27539 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GDF1P27539 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.61□□□□□ -0.23
GDF1P27539 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.61□□□□□ -0.23
GDF1P27539 AC243960.2-201ENST00000600996 747 ntBASIC13.61□□□□□ -0.23
GDF1P27539 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.61□□□□□ -0.23
GDF1P27539 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.61□□□□□ -0.23
GDF1P27539 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GDF1P27539 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF1P27539 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GDF1P27539 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
GDF1P27539 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF1P27539 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF1P27539 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GDF1P27539 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.61□□□□□ -0.23
GDF1P27539 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.61□□□□□ -0.23
GDF1P27539 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GDF1P27539 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDF1P27539 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
GDF1P27539 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
GDF1P27539 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.61□□□□□ -0.23
GDF1P27539 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.61□□□□□ -0.23
GDF1P27539 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.61□□□□□ -0.23
GDF1P27539 AC091951.1-201ENST00000512854 2465 ntBASIC13.61□□□□□ -0.23
GDF1P27539 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
GDF1P27539 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GDF1P27539 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.6□□□□□ -0.23
GDF1P27539 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
GDF1P27539 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.6□□□□□ -0.23
GDF1P27539 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDF1P27539 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GDF1P27539 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
GDF1P27539 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDF1P27539 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDF1P27539 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GDF1P27539 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.6□□□□□ -0.23
GDF1P27539 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GDF1P27539 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDF1P27539 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GDF1P27539 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.6□□□□□ -0.23
GDF1P27539 GOLGA2P4-201ENST00000441462 777 ntBASIC13.6□□□□□ -0.23
GDF1P27539 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
GDF1P27539 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDF1P27539 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.6□□□□□ -0.23
GDF1P27539 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.6□□□□□ -0.23
GDF1P27539 FAM8A2P-201ENST00000528813 1142 ntBASIC13.6□□□□□ -0.23
GDF1P27539 AP000593.2-201ENST00000542775 1433 ntBASIC13.6□□□□□ -0.23
GDF1P27539 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.6□□□□□ -0.23
GDF1P27539 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.6□□□□□ -0.23
GDF1P27539 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDF1P27539 AC244157.2-201ENST00000616239 1006 ntBASIC13.6□□□□□ -0.23
GDF1P27539 MIR6869-201ENST00000619434 62 ntBASIC13.6□□□□□ -0.23
GDF1P27539 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
GDF1P27539 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDF1P27539 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GDF1P27539 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
GDF1P27539 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
GDF1P27539 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
GDF1P27539 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDF1P27539 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDF1P27539 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDF1P27539 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.6□□□□□ -0.23
GDF1P27539 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.6□□□□□ -0.23
GDF1P27539 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GDF1P27539 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.6□□□□□ -0.23
GDF1P27539 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.6□□□□□ -0.23
GDF1P27539 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDF1P27539 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.6□□□□□ -0.23
GDF1P27539 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.59□□□□□ -0.23
GDF1P27539 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.59□□□□□ -0.23
GDF1P27539 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 AC011840.2-201ENST00000563063 1520 ntBASIC13.59□□□□□ -0.23
GDF1P27539 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.59□□□□□ -0.23
GDF1P27539 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
GDF1P27539 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.59□□□□□ -0.23
GDF1P27539 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDF1P27539 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.59□□□□□ -0.23
GDF1P27539 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms