Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.87□□□□□ -0.03
VARSP26640 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.87□□□□□ -0.03
VARSP26640 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.87□□□□□ -0.03
VARSP26640 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.87□□□□□ -0.03
VARSP26640 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.87□□□□□ -0.03
VARSP26640 KRT17P8-201ENST00000540749 863 ntBASIC14.87□□□□□ -0.03
VARSP26640 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC14.87□□□□□ -0.03
VARSP26640 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.87□□□□□ -0.03
VARSP26640 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC14.87□□□□□ -0.03
VARSP26640 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.87□□□□□ -0.03
VARSP26640 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.87□□□□□ -0.03
VARSP26640 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.87□□□□□ -0.03
VARSP26640 MIR8072-201ENST00000614241 80 ntBASIC14.87□□□□□ -0.03
VARSP26640 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.87□□□□□ -0.03
VARSP26640 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
VARSP26640 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VARSP26640 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
VARSP26640 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.87□□□□□ -0.03
VARSP26640 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VARSP26640 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VARSP26640 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
VARSP26640 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
VARSP26640 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VARSP26640 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
VARSP26640 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VARSP26640 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VARSP26640 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.86□□□□□ -0.03
VARSP26640 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.86□□□□□ -0.03
VARSP26640 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.86□□□□□ -0.03
VARSP26640 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.86□□□□□ -0.03
VARSP26640 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 AL139385.1-201ENST00000611744 3272 ntBASIC14.86□□□□□ -0.03
VARSP26640 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.86□□□□□ -0.03
VARSP26640 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.86□□□□□ -0.03
VARSP26640 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.86□□□□□ -0.03
VARSP26640 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.86□□□□□ -0.03
VARSP26640 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.86□□□□□ -0.03
VARSP26640 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.86□□□□□ -0.03
VARSP26640 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.86□□□□□ -0.03
VARSP26640 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.86□□□□□ -0.03
VARSP26640 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.86□□□□□ -0.03
VARSP26640 AC026790.2-201ENST00000606282 430 ntBASIC14.86□□□□□ -0.03
VARSP26640 AC099568.2-201ENST00000609194 695 ntBASIC14.86□□□□□ -0.03
VARSP26640 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
VARSP26640 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
VARSP26640 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
VARSP26640 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.86□□□□□ -0.03
VARSP26640 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
VARSP26640 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VARSP26640 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VARSP26640 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.86□□□□□ -0.03
VARSP26640 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.86□□□□□ -0.03
VARSP26640 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VARSP26640 SLC7A15P-201ENST00000424028 1363 ntBASIC14.85□□□□□ -0.03
VARSP26640 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.85□□□□□ -0.03
VARSP26640 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.85□□□□□ -0.03
VARSP26640 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.85□□□□□ -0.03
VARSP26640 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
VARSP26640 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VARSP26640 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms