Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 EIF3FP3-201ENST00000434851 1086 ntBASIC12.62□□□□□ -0.39
LMO1P25800 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.62□□□□□ -0.39
LMO1P25800 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.62□□□□□ -0.39
LMO1P25800 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.62□□□□□ -0.39
LMO1P25800 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.62□□□□□ -0.39
LMO1P25800 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.62□□□□□ -0.39
LMO1P25800 CLUHP6-201ENST00000580789 941 ntBASIC12.62□□□□□ -0.39
LMO1P25800 CTBP2P3-201ENST00000585629 1255 ntBASIC12.62□□□□□ -0.39
LMO1P25800 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.62□□□□□ -0.39
LMO1P25800 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
LMO1P25800 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LMO1P25800 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.62□□□□□ -0.39
LMO1P25800 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.62□□□□□ -0.39
LMO1P25800 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.62□□□□□ -0.39
LMO1P25800 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.62□□□□□ -0.39
LMO1P25800 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
LMO1P25800 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.62□□□□□ -0.39
LMO1P25800 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.62□□□□□ -0.39
LMO1P25800 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LMO1P25800 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.61□□□□□ -0.39
LMO1P25800 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.61□□□□□ -0.39
LMO1P25800 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.61□□□□□ -0.39
LMO1P25800 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.61□□□□□ -0.39
LMO1P25800 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LMO1P25800 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.61□□□□□ -0.39
LMO1P25800 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.61□□□□□ -0.39
LMO1P25800 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.61□□□□□ -0.39
LMO1P25800 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 AC236430.1-201ENST00000402231 743 ntBASIC12.61□□□□□ -0.39
LMO1P25800 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.61□□□□□ -0.39
LMO1P25800 TLE1P1-201ENST00000422965 589 ntBASIC12.61□□□□□ -0.39
LMO1P25800 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 TPT1P11-201ENST00000458482 498 ntBASIC12.61□□□□□ -0.39
LMO1P25800 AC022137.2-201ENST00000503482 481 ntBASIC12.61□□□□□ -0.39
LMO1P25800 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.61□□□□□ -0.39
LMO1P25800 KRT18P25-201ENST00000508931 1278 ntBASIC12.61□□□□□ -0.39
LMO1P25800 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.61□□□□□ -0.39
LMO1P25800 AC140912.1-201ENST00000577171 1054 ntBASIC12.61□□□□□ -0.39
LMO1P25800 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.61□□□□□ -0.39
LMO1P25800 AL035252.4-201ENST00000624174 288 ntBASIC12.61□□□□□ -0.39
LMO1P25800 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
LMO1P25800 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.61□□□□□ -0.39
LMO1P25800 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.61□□□□□ -0.39
LMO1P25800 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
LMO1P25800 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LMO1P25800 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LMO1P25800 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
LMO1P25800 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
LMO1P25800 AC055811.4-201ENST00000624039 1754 ntBASIC12.61□□□□□ -0.39
LMO1P25800 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LMO1P25800 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.61□□□□□ -0.39
LMO1P25800 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LMO1P25800 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LMO1P25800 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LMO1P25800 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms