Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
COL8A2P25067 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
COL8A2P25067 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.69□□□□□ -0.38
COL8A2P25067 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.69□□□□□ -0.38
COL8A2P25067 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.69□□□□□ -0.38
COL8A2P25067 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
COL8A2P25067 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.69□□□□□ -0.38
COL8A2P25067 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 AC007969.1-201ENST00000433675 447 ntBASIC12.69□□□□□ -0.38
COL8A2P25067 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.69□□□□□ -0.38
COL8A2P25067 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.69□□□□□ -0.38
COL8A2P25067 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.69□□□□□ -0.38
COL8A2P25067 AC104982.3-201ENST00000581995 514 ntBASIC12.69□□□□□ -0.38
COL8A2P25067 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.69□□□□□ -0.38
COL8A2P25067 MIR6787-201ENST00000616675 61 ntBASIC12.69□□□□□ -0.38
COL8A2P25067 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.69□□□□□ -0.38
COL8A2P25067 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
COL8A2P25067 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.69□□□□□ -0.38
COL8A2P25067 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
COL8A2P25067 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.69□□□□□ -0.38
COL8A2P25067 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
COL8A2P25067 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.69□□□□□ -0.38
COL8A2P25067 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.69□□□□□ -0.38
COL8A2P25067 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
COL8A2P25067 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
COL8A2P25067 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.69□□□□□ -0.38
COL8A2P25067 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
COL8A2P25067 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
COL8A2P25067 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.69□□□□□ -0.38
COL8A2P25067 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.69□□□□□ -0.38
COL8A2P25067 LILRP1-201ENST00000444199 1370 ntBASIC12.69□□□□□ -0.38
COL8A2P25067 AC020907.1-201ENST00000616460 1350 ntBASIC12.69□□□□□ -0.38
COL8A2P25067 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.68□□□□□ -0.38
COL8A2P25067 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.68□□□□□ -0.38
COL8A2P25067 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.68□□□□□ -0.38
COL8A2P25067 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.68□□□□□ -0.38
COL8A2P25067 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
COL8A2P25067 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.68□□□□□ -0.38
COL8A2P25067 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.68□□□□□ -0.38
COL8A2P25067 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
COL8A2P25067 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.68□□□□□ -0.38
COL8A2P25067 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.68□□□□□ -0.38
COL8A2P25067 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.68□□□□□ -0.38
COL8A2P25067 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.68□□□□□ -0.38
COL8A2P25067 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.68□□□□□ -0.38
COL8A2P25067 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.68□□□□□ -0.38
COL8A2P25067 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.68□□□□□ -0.38
COL8A2P25067 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.68□□□□□ -0.38
COL8A2P25067 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.68□□□□□ -0.38
COL8A2P25067 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 AC243960.2-201ENST00000600996 747 ntBASIC12.68□□□□□ -0.38
COL8A2P25067 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
COL8A2P25067 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
COL8A2P25067 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
COL8A2P25067 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.68□□□□□ -0.38
COL8A2P25067 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
COL8A2P25067 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 AL109954.1-202ENST00000564051 2148 ntBASIC12.68□□□□□ -0.38
COL8A2P25067 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms