Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RN7SL48P-201ENST00000579283 293 ntBASIC15.17■□□□□ 0.02
HLA-DPA1P20036 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
HLA-DPA1P20036 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 COX5BP8-201ENST00000416911 349 ntBASIC15.16■□□□□ 0.02
HLA-DPA1P20036 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 TTTY23B-201ENST00000442790 549 ntBASIC15.16■□□□□ 0.02
HLA-DPA1P20036 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 KRT17P7-201ENST00000451704 1104 ntBASIC15.16■□□□□ 0.02
HLA-DPA1P20036 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 AC232323.1-201ENST00000540724 2099 ntBASIC15.16■□□□□ 0.02
HLA-DPA1P20036 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 AL138709.1-201ENST00000614840 1693 ntBASIC15.16■□□□□ 0.02
HLA-DPA1P20036 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 MTHFR-210ENST00000641407 2387 ntBASIC15.16■□□□□ 0.02
HLA-DPA1P20036 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HLA-DPA1P20036 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms