Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AP001063.1-201ENST00000568332 529 ntBASIC13.85□□□□□ -0.19
THBS1P07996 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
THBS1P07996 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.85□□□□□ -0.19
THBS1P07996 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
THBS1P07996 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
THBS1P07996 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
THBS1P07996 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
THBS1P07996 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
THBS1P07996 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
THBS1P07996 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.85□□□□□ -0.19
THBS1P07996 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
THBS1P07996 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
THBS1P07996 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
THBS1P07996 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
THBS1P07996 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
THBS1P07996 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.85□□□□□ -0.19
THBS1P07996 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
THBS1P07996 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
THBS1P07996 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.84□□□□□ -0.19
THBS1P07996 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
THBS1P07996 AGGF1P1-201ENST00000509500 2073 ntBASIC13.84□□□□□ -0.19
THBS1P07996 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.84□□□□□ -0.19
THBS1P07996 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
THBS1P07996 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
THBS1P07996 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
THBS1P07996 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
THBS1P07996 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
THBS1P07996 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.84□□□□□ -0.19
THBS1P07996 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
THBS1P07996 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
THBS1P07996 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
THBS1P07996 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.84□□□□□ -0.19
THBS1P07996 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.84□□□□□ -0.19
THBS1P07996 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.84□□□□□ -0.19
THBS1P07996 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
THBS1P07996 OR8S1-201ENST00000310194 1080 ntBASIC13.84□□□□□ -0.19
THBS1P07996 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
THBS1P07996 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
THBS1P07996 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
THBS1P07996 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.84□□□□□ -0.19
THBS1P07996 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.84□□□□□ -0.19
THBS1P07996 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.84□□□□□ -0.19
THBS1P07996 AC007969.1-201ENST00000433675 447 ntBASIC13.84□□□□□ -0.19
THBS1P07996 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.84□□□□□ -0.19
THBS1P07996 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.84□□□□□ -0.19
THBS1P07996 KRT18P25-201ENST00000508931 1278 ntBASIC13.84□□□□□ -0.19
THBS1P07996 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.84□□□□□ -0.19
THBS1P07996 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
THBS1P07996 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.84□□□□□ -0.19
THBS1P07996 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
THBS1P07996 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.84□□□□□ -0.19
THBS1P07996 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.84□□□□□ -0.19
THBS1P07996 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.84□□□□□ -0.19
THBS1P07996 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.84□□□□□ -0.19
THBS1P07996 CHCHD2P3-201ENST00000603038 451 ntBASIC13.84□□□□□ -0.19
THBS1P07996 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.84□□□□□ -0.19
THBS1P07996 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.84□□□□□ -0.19
THBS1P07996 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.84□□□□□ -0.19
THBS1P07996 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.84□□□□□ -0.19
THBS1P07996 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
THBS1P07996 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.84□□□□□ -0.19
THBS1P07996 AC097359.2-201ENST00000604992 2389 ntBASIC13.84□□□□□ -0.19
THBS1P07996 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
THBS1P07996 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
THBS1P07996 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
THBS1P07996 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
THBS1P07996 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
THBS1P07996 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
THBS1P07996 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
THBS1P07996 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
THBS1P07996 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
THBS1P07996 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
THBS1P07996 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
THBS1P07996 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
THBS1P07996 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
THBS1P07996 HSPA7-201ENST00000445535 1927 ntBASIC13.84□□□□□ -0.19
THBS1P07996 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
THBS1P07996 SNX18-202ENST00000343017 3140 ntBASIC13.84□□□□□ -0.19
THBS1P07996 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
THBS1P07996 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.83□□□□□ -0.19
THBS1P07996 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
THBS1P07996 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
THBS1P07996 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.83□□□□□ -0.19
THBS1P07996 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
THBS1P07996 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.83□□□□□ -0.19
THBS1P07996 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
THBS1P07996 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
THBS1P07996 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
THBS1P07996 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.19
THBS1P07996 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
THBS1P07996 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
THBS1P07996 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.83□□□□□ -0.2
THBS1P07996 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.83□□□□□ -0.2
THBS1P07996 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.83□□□□□ -0.2
THBS1P07996 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
THBS1P07996 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
THBS1P07996 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
THBS1P07996 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
THBS1P07996 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
THBS1P07996 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms