Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.14■□□□□ 0.01
RETP07949 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RETP07949 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RETP07949 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RETP07949 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.13■□□□□ 0.01
RETP07949 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.13■□□□□ 0.01
RETP07949 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 AL157791.1-201ENST00000553667 1699 ntBASIC15.13■□□□□ 0.01
RETP07949 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.13■□□□□ 0.01
RETP07949 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.13■□□□□ 0.01
RETP07949 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RETP07949 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RETP07949 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.13■□□□□ 0.01
RETP07949 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.13■□□□□ 0.01
RETP07949 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.13■□□□□ 0.01
RETP07949 TUBB8P8-201ENST00000458717 1058 ntBASIC15.13■□□□□ 0.01
RETP07949 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.13■□□□□ 0.01
RETP07949 RN7SL181P-201ENST00000462921 277 ntBASIC15.13■□□□□ 0.01
RETP07949 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.13■□□□□ 0.01
RETP07949 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.13■□□□□ 0.01
RETP07949 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RETP07949 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.13■□□□□ 0.01
RETP07949 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.13■□□□□ 0.01
RETP07949 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.13■□□□□ 0.01
RETP07949 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.13■□□□□ 0.01
RETP07949 AC020922.3-201ENST00000595064 547 ntBASIC15.13■□□□□ 0.01
RETP07949 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.13■□□□□ 0.01
RETP07949 AC025181.2-201ENST00000606994 802 ntBASIC15.13■□□□□ 0.01
RETP07949 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.13■□□□□ 0.01
RETP07949 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.13■□□□□ 0.01
RETP07949 AC006453.1-201ENST00000636037 1257 ntBASIC15.13■□□□□ 0.01
RETP07949 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RETP07949 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RETP07949 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RETP07949 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.12■□□□□ 0.01
RETP07949 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.12■□□□□ 0.01
RETP07949 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.12■□□□□ 0.01
RETP07949 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RETP07949 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
RETP07949 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.12■□□□□ 0.01
RETP07949 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 AL139094.1-201ENST00000405549 1188 ntBASIC15.12■□□□□ 0.01
RETP07949 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RETP07949 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RETP07949 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.12■□□□□ 0.01
RETP07949 CHMP1AP1-201ENST00000445563 662 ntBASIC15.12■□□□□ 0.01
RETP07949 FGFR3P1-201ENST00000449999 601 ntBASIC15.12■□□□□ 0.01
RETP07949 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.12■□□□□ 0.01
RETP07949 AC135983.4-201ENST00000564116 1262 ntBASIC15.12■□□□□ 0.01
RETP07949 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.12■□□□□ 0.01
RETP07949 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RETP07949 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.12■□□□□ 0.01
RETP07949 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RETP07949 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.12■□□□□ 0.01
RETP07949 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.12■□□□□ 0.01
RETP07949 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms