Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
TPM3P06753 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TPM3P06753 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 AL590627.1-203ENST00000421194 1026 ntBASIC16.9■□□□□ 0.3
TPM3P06753 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM3P06753 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
TPM3P06753 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.9■□□□□ 0.3
TPM3P06753 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM3P06753 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM3P06753 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 KRT126P-201ENST00000549467 1181 ntBASIC16.9■□□□□ 0.3
TPM3P06753 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
TPM3P06753 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
TPM3P06753 AC003101.2-201ENST00000612557 442 ntBASIC16.9■□□□□ 0.3
TPM3P06753 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM3P06753 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.9■□□□□ 0.3
TPM3P06753 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.9■□□□□ 0.3
TPM3P06753 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.9■□□□□ 0.3
TPM3P06753 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TPM3P06753 TCAM1P-207ENST00000485295 1537 ntBASIC16.9■□□□□ 0.3
TPM3P06753 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TPM3P06753 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC16.89■□□□□ 0.3
TPM3P06753 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
TPM3P06753 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TPM3P06753 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TPM3P06753 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TPM3P06753 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 AC023274.1-201ENST00000418278 595 ntBASIC16.89■□□□□ 0.29
TPM3P06753 MCCD1P2-201ENST00000423228 335 ntBASIC16.89■□□□□ 0.29
TPM3P06753 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.89■□□□□ 0.29
TPM3P06753 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.89■□□□□ 0.29
TPM3P06753 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.89■□□□□ 0.29
TPM3P06753 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.89■□□□□ 0.29
TPM3P06753 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.89■□□□□ 0.29
TPM3P06753 C20orf181-201ENST00000623918 480 ntBASIC16.89■□□□□ 0.29
TPM3P06753 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TPM3P06753 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.89■□□□□ 0.29
TPM3P06753 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
TPM3P06753 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TPM3P06753 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TPM3P06753 AC073548.1-201ENST00000624088 1882 ntBASIC16.88■□□□□ 0.29
TPM3P06753 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM3P06753 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TPM3P06753 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM3P06753 AL731571.1-201ENST00000617058 5428 ntBASIC16.88■□□□□ 0.29
TPM3P06753 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM3P06753 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM3P06753 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TPM3P06753 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM3P06753 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC16.88■□□□□ 0.29
TPM3P06753 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TPM3P06753 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM3P06753 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.88■□□□□ 0.29
TPM3P06753 AC005237.2-201ENST00000434368 219 ntBASIC16.88■□□□□ 0.29
TPM3P06753 MKNK2P1-201ENST00000437526 628 ntBASIC16.88■□□□□ 0.29
TPM3P06753 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.88■□□□□ 0.29
TPM3P06753 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.88■□□□□ 0.29
TPM3P06753 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.88■□□□□ 0.29
TPM3P06753 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TPM3P06753 AC040169.1-201ENST00000565382 521 ntBASIC16.88■□□□□ 0.29
TPM3P06753 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM3P06753 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.88■□□□□ 0.29
TPM3P06753 AC007967.4-201ENST00000614700 386 ntBASIC16.88■□□□□ 0.29
TPM3P06753 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TPM3P06753 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.88■□□□□ 0.29
TPM3P06753 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM3P06753 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TPM3P06753 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms