Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.83□□□□□ -0.04
PDGFBP01127 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PDGFBP01127 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.83□□□□□ -0.04
PDGFBP01127 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFBP01127 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.82□□□□□ -0.04
PDGFBP01127 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PDGFBP01127 AC025183.3-201ENST00000623526 1482 ntBASIC14.82□□□□□ -0.04
PDGFBP01127 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFBP01127 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PDGFBP01127 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFBP01127 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PDGFBP01127 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFBP01127 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFBP01127 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
PDGFBP01127 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFBP01127 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFBP01127 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PDGFBP01127 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.82□□□□□ -0.04
PDGFBP01127 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC14.82□□□□□ -0.04
PDGFBP01127 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFBP01127 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
PDGFBP01127 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC14.82□□□□□ -0.04
PDGFBP01127 AC004522.1-201ENST00000419978 654 ntBASIC14.82□□□□□ -0.04
PDGFBP01127 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC14.82□□□□□ -0.04
PDGFBP01127 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFBP01127 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.82□□□□□ -0.04
PDGFBP01127 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFBP01127 AC226150.1-201ENST00000544259 466 ntBASIC14.82□□□□□ -0.04
PDGFBP01127 MIR2392-201ENST00000584881 84 ntBASIC14.82□□□□□ -0.04
PDGFBP01127 AC004686.1-201ENST00000605113 538 ntBASIC14.82□□□□□ -0.04
PDGFBP01127 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC14.82□□□□□ -0.04
PDGFBP01127 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.82□□□□□ -0.04
PDGFBP01127 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFBP01127 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
PDGFBP01127 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFBP01127 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.82□□□□□ -0.04
PDGFBP01127 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFBP01127 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFBP01127 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PDGFBP01127 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFBP01127 ZBED1P1-201ENST00000502364 1930 ntBASIC14.82□□□□□ -0.04
PDGFBP01127 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFBP01127 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.82□□□□□ -0.04
PDGFBP01127 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFBP01127 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFBP01127 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFBP01127 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDGFBP01127 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
PDGFBP01127 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PDGFBP01127 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.81□□□□□ -0.04
PDGFBP01127 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PDGFBP01127 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.81□□□□□ -0.04
PDGFBP01127 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.81□□□□□ -0.04
PDGFBP01127 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.81□□□□□ -0.04
PDGFBP01127 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 SALL4P5-201ENST00000419001 1760 ntBASIC14.81□□□□□ -0.04
PDGFBP01127 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PDGFBP01127 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PDGFBP01127 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PDGFBP01127 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PDGFBP01127 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.81□□□□□ -0.04
PDGFBP01127 ACTG1P19-201ENST00000418987 1116 ntBASIC14.81□□□□□ -0.04
PDGFBP01127 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.81□□□□□ -0.04
PDGFBP01127 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.81□□□□□ -0.04
PDGFBP01127 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.81□□□□□ -0.04
PDGFBP01127 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC14.81□□□□□ -0.04
PDGFBP01127 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.81□□□□□ -0.04
PDGFBP01127 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC14.81□□□□□ -0.04
PDGFBP01127 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 AC026470.1-201ENST00000478038 846 ntBASIC14.81□□□□□ -0.04
PDGFBP01127 RPS5-204ENST00000598098 536 ntTSL 2 BASIC14.81□□□□□ -0.04
PDGFBP01127 AC009145.4-201ENST00000625119 1294 ntBASIC14.81□□□□□ -0.04
PDGFBP01127 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.81□□□□□ -0.04
PDGFBP01127 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC14.81□□□□□ -0.04
PDGFBP01127 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.81□□□□□ -0.04
PDGFBP01127 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.81□□□□□ -0.04
PDGFBP01127 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC14.81□□□□□ -0.04
PDGFBP01127 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 CICP13-201ENST00000422015 2789 ntBASIC14.81□□□□□ -0.04
PDGFBP01127 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFBP01127 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.81□□□□□ -0.04
PDGFBP01127 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms