Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MBD4O95243 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
MBD4O95243 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MBD4O95243 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
MBD4O95243 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MBD4O95243 E2F3P2-201ENST00000447755 1422 ntBASIC17.82■□□□□ 0.44
MBD4O95243 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
MBD4O95243 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MBD4O95243 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MBD4O95243 SHC1P1-201ENST00000425230 1745 ntBASIC17.82■□□□□ 0.44
MBD4O95243 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MBD4O95243 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MBD4O95243 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MBD4O95243 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MBD4O95243 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.82■□□□□ 0.44
MBD4O95243 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
MBD4O95243 AL354877.1-201ENST00000424412 413 ntBASIC17.82■□□□□ 0.44
MBD4O95243 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MBD4O95243 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.82■□□□□ 0.44
MBD4O95243 ZNF767P-206ENST00000513792 565 ntBASIC17.82■□□□□ 0.44
MBD4O95243 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.82■□□□□ 0.44
MBD4O95243 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MBD4O95243 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.82■□□□□ 0.44
MBD4O95243 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MBD4O95243 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.82■□□□□ 0.44
MBD4O95243 AL008638.5-201ENST00000623814 1298 ntBASIC17.82■□□□□ 0.44
MBD4O95243 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
MBD4O95243 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MBD4O95243 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MBD4O95243 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MBD4O95243 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
MBD4O95243 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
MBD4O95243 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MBD4O95243 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MBD4O95243 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD4O95243 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD4O95243 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD4O95243 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD4O95243 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.81■□□□□ 0.44
MBD4O95243 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD4O95243 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
MBD4O95243 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD4O95243 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD4O95243 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.81■□□□□ 0.44
MBD4O95243 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD4O95243 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD4O95243 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD4O95243 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD4O95243 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MBD4O95243 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
MBD4O95243 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD4O95243 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.81■□□□□ 0.44
MBD4O95243 AC010141.1-201ENST00000411585 623 ntBASIC17.81■□□□□ 0.44
MBD4O95243 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.81■□□□□ 0.44
MBD4O95243 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.81■□□□□ 0.44
MBD4O95243 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MBD4O95243 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.81■□□□□ 0.44
MBD4O95243 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.81■□□□□ 0.44
MBD4O95243 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.81■□□□□ 0.44
MBD4O95243 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.81■□□□□ 0.44
MBD4O95243 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
MBD4O95243 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MBD4O95243 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
MBD4O95243 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD4O95243 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.81■□□□□ 0.44
MBD4O95243 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD4O95243 TNRC18P2-201ENST00000417666 2714 ntBASIC17.81■□□□□ 0.44
MBD4O95243 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD4O95243 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MBD4O95243 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MBD4O95243 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.81■□□□□ 0.44
MBD4O95243 AC006058.4-201ENST00000624016 1670 ntBASIC17.8■□□□□ 0.44
MBD4O95243 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.8■□□□□ 0.44
MBD4O95243 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.8■□□□□ 0.44
MBD4O95243 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.8■□□□□ 0.44
MBD4O95243 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
MBD4O95243 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.8■□□□□ 0.44
MBD4O95243 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MBD4O95243 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 AC099548.2-209ENST00000480264 625 ntBASIC17.8■□□□□ 0.44
MBD4O95243 FAM8A2P-201ENST00000528813 1142 ntBASIC17.8■□□□□ 0.44
MBD4O95243 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.8■□□□□ 0.44
MBD4O95243 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MBD4O95243 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms