Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRIM3O75382 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM3O75382 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM3O75382 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM3O75382 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.09□□□□□ -0.15
TRIM3O75382 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM3O75382 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM3O75382 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM3O75382 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRIM3O75382 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRIM3O75382 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.08□□□□□ -0.15
TRIM3O75382 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
TRIM3O75382 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRIM3O75382 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.08□□□□□ -0.15
TRIM3O75382 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TRIM3O75382 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRIM3O75382 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRIM3O75382 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TRIM3O75382 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.08□□□□□ -0.16
TRIM3O75382 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRIM3O75382 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 ACKR1-201ENST00000368121 1240 ntBASIC14.08□□□□□ -0.16
TRIM3O75382 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
TRIM3O75382 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TRIM3O75382 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM3O75382 AC079776.1-201ENST00000401540 1152 ntBASIC14.08□□□□□ -0.16
TRIM3O75382 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM3O75382 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.08□□□□□ -0.16
TRIM3O75382 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.08□□□□□ -0.16
TRIM3O75382 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 SLC25A47P1-201ENST00000531577 414 ntBASIC14.08□□□□□ -0.16
TRIM3O75382 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.08□□□□□ -0.16
TRIM3O75382 PTP4A1P2-201ENST00000546033 454 ntBASIC14.08□□□□□ -0.16
TRIM3O75382 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM3O75382 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.08□□□□□ -0.16
TRIM3O75382 BTNL10-201ENST00000595971 695 ntBASIC14.08□□□□□ -0.16
TRIM3O75382 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TRIM3O75382 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIM3O75382 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM3O75382 AL645728.2-202ENST00000641679 227 ntBASIC14.08□□□□□ -0.16
TRIM3O75382 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
TRIM3O75382 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TRIM3O75382 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
TRIM3O75382 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRIM3O75382 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRIM3O75382 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM3O75382 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIM3O75382 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIM3O75382 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM3O75382 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TRIM3O75382 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIM3O75382 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIM3O75382 KRT8P44-201ENST00000441609 1350 ntBASIC14.08□□□□□ -0.16
TRIM3O75382 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM3O75382 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM3O75382 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
TRIM3O75382 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRIM3O75382 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRIM3O75382 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM3O75382 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRIM3O75382 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIM3O75382 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRIM3O75382 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIM3O75382 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TRIM3O75382 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRIM3O75382 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM3O75382 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms