Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPHP4O75161 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC20.45■□□□□ 0.86
NPHP4O75161 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPHP4O75161 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC20.45■□□□□ 0.86
NPHP4O75161 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC20.45■□□□□ 0.86
NPHP4O75161 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC20.45■□□□□ 0.86
NPHP4O75161 RARS-210ENST00000626454 177 ntTSL 5 BASIC20.45■□□□□ 0.86
NPHP4O75161 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NPHP4O75161 AP003680.1-201ENST00000598970 3660 ntBASIC20.45■□□□□ 0.86
NPHP4O75161 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPHP4O75161 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NPHP4O75161 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NPHP4O75161 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPHP4O75161 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPHP4O75161 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC20.45■□□□□ 0.86
NPHP4O75161 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NPHP4O75161 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NPHP4O75161 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC20.45■□□□□ 0.86
NPHP4O75161 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPHP4O75161 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPHP4O75161 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC20.45■□□□□ 0.86
NPHP4O75161 PGAM1P11-201ENST00000416729 680 ntBASIC20.44■□□□□ 0.86
NPHP4O75161 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC20.44■□□□□ 0.86
NPHP4O75161 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC20.44■□□□□ 0.86
NPHP4O75161 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC20.44■□□□□ 0.86
NPHP4O75161 AC090386.2-201ENST00000623010 1039 ntBASIC20.44■□□□□ 0.86
NPHP4O75161 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC20.44■□□□□ 0.86
NPHP4O75161 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NPHP4O75161 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPHP4O75161 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPHP4O75161 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPHP4O75161 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPHP4O75161 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
NPHP4O75161 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC20.44■□□□□ 0.86
NPHP4O75161 MSANTD2P1-201ENST00000445341 1368 ntBASIC20.44■□□□□ 0.86
NPHP4O75161 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPHP4O75161 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NPHP4O75161 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPHP4O75161 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPHP4O75161 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NPHP4O75161 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPHP4O75161 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPHP4O75161 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPHP4O75161 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NPHP4O75161 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20.44■□□□□ 0.86
NPHP4O75161 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC20.44■□□□□ 0.86
NPHP4O75161 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPHP4O75161 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NPHP4O75161 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
NPHP4O75161 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC20.44■□□□□ 0.86
NPHP4O75161 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPHP4O75161 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPHP4O75161 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC20.44■□□□□ 0.86
NPHP4O75161 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPHP4O75161 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPHP4O75161 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NPHP4O75161 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPHP4O75161 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC20.44■□□□□ 0.86
NPHP4O75161 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC20.44■□□□□ 0.86
NPHP4O75161 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPHP4O75161 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC20.44■□□□□ 0.86
NPHP4O75161 ASS1P2-201ENST00000439895 1223 ntBASIC20.44■□□□□ 0.86
NPHP4O75161 AC027612.2-202ENST00000445955 1199 ntBASIC20.44■□□□□ 0.86
NPHP4O75161 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC20.44■□□□□ 0.86
NPHP4O75161 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC20.44■□□□□ 0.86
NPHP4O75161 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPHP4O75161 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC20.44■□□□□ 0.86
NPHP4O75161 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC20.44■□□□□ 0.86
NPHP4O75161 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC20.44■□□□□ 0.86
NPHP4O75161 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NPHP4O75161 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPHP4O75161 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC20.44■□□□□ 0.86
NPHP4O75161 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NPHP4O75161 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPHP4O75161 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPHP4O75161 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPHP4O75161 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NPHP4O75161 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC20.43■□□□□ 0.86
NPHP4O75161 AC019109.1-201ENST00000401725 1874 ntBASIC20.43■□□□□ 0.86
NPHP4O75161 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPHP4O75161 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NPHP4O75161 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NPHP4O75161 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPHP4O75161 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NPHP4O75161 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.43■□□□□ 0.86
NPHP4O75161 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NPHP4O75161 BAX-205ENST00000391871 687 ntTSL 5 BASIC20.43■□□□□ 0.86
NPHP4O75161 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NPHP4O75161 OR10N1P-201ENST00000392758 869 ntBASIC20.43■□□□□ 0.86
NPHP4O75161 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC20.43■□□□□ 0.86
NPHP4O75161 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC20.43■□□□□ 0.86
NPHP4O75161 CTBP2P6-201ENST00000526402 1229 ntBASIC20.43■□□□□ 0.86
NPHP4O75161 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC20.43■□□□□ 0.86
NPHP4O75161 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NPHP4O75161 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC20.43■□□□□ 0.86
NPHP4O75161 PHF23-213ENST00000613632 850 ntTSL 5 BASIC20.43■□□□□ 0.86
NPHP4O75161 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC20.43■□□□□ 0.86
NPHP4O75161 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPHP4O75161 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NPHP4O75161 AC139712.1-201ENST00000378256 1875 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms