Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.42■□□□□ 0.38
CTNND1O60716 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.42■□□□□ 0.38
CTNND1O60716 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.42■□□□□ 0.38
CTNND1O60716 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.42■□□□□ 0.38
CTNND1O60716 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.42■□□□□ 0.38
CTNND1O60716 AL157407.1-201ENST00000435784 904 ntBASIC17.42■□□□□ 0.38
CTNND1O60716 AL035414.1-201ENST00000451327 857 ntBASIC17.42■□□□□ 0.38
CTNND1O60716 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.42■□□□□ 0.38
CTNND1O60716 AC019193.1-201ENST00000506678 823 ntBASIC17.42■□□□□ 0.38
CTNND1O60716 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.42■□□□□ 0.38
CTNND1O60716 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.42■□□□□ 0.38
CTNND1O60716 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.42■□□□□ 0.38
CTNND1O60716 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CTNND1O60716 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CTNND1O60716 U62317.3-201ENST00000608319 855 ntBASIC17.42■□□□□ 0.38
CTNND1O60716 AC018635.2-201ENST00000608625 364 ntBASIC17.42■□□□□ 0.38
CTNND1O60716 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.42■□□□□ 0.38
CTNND1O60716 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.42■□□□□ 0.38
CTNND1O60716 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.42■□□□□ 0.38
CTNND1O60716 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CTNND1O60716 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CTNND1O60716 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTNND1O60716 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CTNND1O60716 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CTNND1O60716 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CTNND1O60716 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CTNND1O60716 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.41■□□□□ 0.38
CTNND1O60716 AC026316.1-201ENST00000398900 414 ntBASIC17.41■□□□□ 0.38
CTNND1O60716 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CTNND1O60716 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 LDHBP1-201ENST00000455730 1119 ntBASIC17.41■□□□□ 0.38
CTNND1O60716 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.41■□□□□ 0.38
CTNND1O60716 GCOM2-201ENST00000509133 1104 ntBASIC17.41■□□□□ 0.38
CTNND1O60716 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CTNND1O60716 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.41■□□□□ 0.38
CTNND1O60716 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.41■□□□□ 0.38
CTNND1O60716 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.41■□□□□ 0.38
CTNND1O60716 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.41■□□□□ 0.38
CTNND1O60716 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTNND1O60716 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.41■□□□□ 0.38
CTNND1O60716 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.41■□□□□ 0.38
CTNND1O60716 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTNND1O60716 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNND1O60716 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNND1O60716 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTNND1O60716 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNND1O60716 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTNND1O60716 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.4■□□□□ 0.38
CTNND1O60716 DBET-201ENST00000630918 3363 ntBASIC17.4■□□□□ 0.38
CTNND1O60716 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.4■□□□□ 0.38
CTNND1O60716 AC069218.1-201ENST00000435269 762 ntBASIC17.4■□□□□ 0.38
CTNND1O60716 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTNND1O60716 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.4■□□□□ 0.38
CTNND1O60716 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CTNND1O60716 IGLV3-15-201ENST00000518356 244 ntBASIC17.4■□□□□ 0.38
CTNND1O60716 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.4■□□□□ 0.38
CTNND1O60716 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.4■□□□□ 0.38
CTNND1O60716 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
CTNND1O60716 AC131206.1-201ENST00000538078 1211 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms