Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.44□□□□□ -0.26
CXCL13O43927 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CXCL13O43927 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL13O43927 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.44□□□□□ -0.26
CXCL13O43927 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CXCL13O43927 AC007969.1-201ENST00000433675 447 ntBASIC13.44□□□□□ -0.26
CXCL13O43927 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.44□□□□□ -0.26
CXCL13O43927 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.44□□□□□ -0.26
CXCL13O43927 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.44□□□□□ -0.26
CXCL13O43927 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.44□□□□□ -0.26
CXCL13O43927 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
CXCL13O43927 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.44□□□□□ -0.26
CXCL13O43927 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.44□□□□□ -0.26
CXCL13O43927 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.44□□□□□ -0.26
CXCL13O43927 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.44□□□□□ -0.26
CXCL13O43927 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL13O43927 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL13O43927 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.44□□□□□ -0.26
CXCL13O43927 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.44□□□□□ -0.26
CXCL13O43927 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL13O43927 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CXCL13O43927 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CXCL13O43927 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL13O43927 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL13O43927 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.44□□□□□ -0.26
CXCL13O43927 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL13O43927 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.44□□□□□ -0.26
CXCL13O43927 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL13O43927 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CXCL13O43927 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL13O43927 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL13O43927 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL13O43927 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL13O43927 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL13O43927 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL13O43927 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.44□□□□□ -0.26
CXCL13O43927 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
CXCL13O43927 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.43□□□□□ -0.26
CXCL13O43927 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.43□□□□□ -0.26
CXCL13O43927 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CXCL13O43927 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CXCL13O43927 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.43□□□□□ -0.26
CXCL13O43927 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
CXCL13O43927 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.43□□□□□ -0.26
CXCL13O43927 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.43□□□□□ -0.26
CXCL13O43927 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.43□□□□□ -0.26
CXCL13O43927 HOMER2P2-201ENST00000451621 847 ntBASIC13.43□□□□□ -0.26
CXCL13O43927 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.43□□□□□ -0.26
CXCL13O43927 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.43□□□□□ -0.26
CXCL13O43927 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CXCL13O43927 RNA5SP412-201ENST00000516234 123 ntBASIC13.43□□□□□ -0.26
CXCL13O43927 AP003171.2-201ENST00000528208 925 ntBASIC13.43□□□□□ -0.26
CXCL13O43927 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.43□□□□□ -0.26
CXCL13O43927 AP006547.1-201ENST00000563435 692 ntBASIC13.43□□□□□ -0.26
CXCL13O43927 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
CXCL13O43927 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 AC009542.2-202ENST00000619004 1067 ntBASIC13.43□□□□□ -0.26
CXCL13O43927 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.43□□□□□ -0.26
CXCL13O43927 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.43□□□□□ -0.26
CXCL13O43927 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CXCL13O43927 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.43□□□□□ -0.26
CXCL13O43927 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.43□□□□□ -0.26
CXCL13O43927 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 AC011840.2-201ENST00000563063 1520 ntBASIC13.43□□□□□ -0.26
CXCL13O43927 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CXCL13O43927 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 SALL4P5-201ENST00000419001 1760 ntBASIC13.43□□□□□ -0.26
CXCL13O43927 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CXCL13O43927 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.42□□□□□ -0.26
CXCL13O43927 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCL13O43927 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCL13O43927 AC020910.5-201ENST00000623668 1865 ntBASIC13.42□□□□□ -0.26
CXCL13O43927 INE2-201ENST00000630399 1874 ntBASIC13.42□□□□□ -0.26
CXCL13O43927 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.42□□□□□ -0.26
CXCL13O43927 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CXCL13O43927 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCL13O43927 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCL13O43927 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCL13O43927 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CXCL13O43927 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms