Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.56□□□□□ -0.08
SLC28A2O43868 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SLC28A2O43868 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SLC28A2O43868 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SLC28A2O43868 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SLC28A2O43868 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.56□□□□□ -0.08
SLC28A2O43868 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SLC28A2O43868 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC28A2O43868 LINC00528-201ENST00000600723 2160 ntBASIC14.56□□□□□ -0.08
SLC28A2O43868 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.55□□□□□ -0.08
SLC28A2O43868 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SLC28A2O43868 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC28A2O43868 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SLC28A2O43868 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.55□□□□□ -0.08
SLC28A2O43868 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC28A2O43868 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.55□□□□□ -0.08
SLC28A2O43868 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SLC28A2O43868 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC28A2O43868 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 CICP11-201ENST00000434745 2827 ntBASIC14.55□□□□□ -0.08
SLC28A2O43868 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.55□□□□□ -0.08
SLC28A2O43868 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.55□□□□□ -0.08
SLC28A2O43868 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 FNTAP2-201ENST00000430308 634 ntBASIC14.55□□□□□ -0.08
SLC28A2O43868 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.55□□□□□ -0.08
SLC28A2O43868 Z93015.1-201ENST00000451718 390 ntBASIC14.55□□□□□ -0.08
SLC28A2O43868 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC28A2O43868 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.55□□□□□ -0.08
SLC28A2O43868 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SLC28A2O43868 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.55□□□□□ -0.08
SLC28A2O43868 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC28A2O43868 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC28A2O43868 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC28A2O43868 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.55□□□□□ -0.08
SLC28A2O43868 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.55□□□□□ -0.08
SLC28A2O43868 AL359711.2-201ENST00000563105 872 ntBASIC14.55□□□□□ -0.08
SLC28A2O43868 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.55□□□□□ -0.08
SLC28A2O43868 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.55□□□□□ -0.08
SLC28A2O43868 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC28A2O43868 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.55□□□□□ -0.08
SLC28A2O43868 AC025048.3-201ENST00000590609 569 ntBASIC14.55□□□□□ -0.08
SLC28A2O43868 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 AC020914.3-201ENST00000594712 304 ntBASIC14.55□□□□□ -0.08
SLC28A2O43868 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.55□□□□□ -0.08
SLC28A2O43868 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.55□□□□□ -0.08
SLC28A2O43868 AC005702.4-201ENST00000618393 416 ntBASIC14.55□□□□□ -0.08
SLC28A2O43868 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.55□□□□□ -0.08
SLC28A2O43868 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 AC106881.1-201ENST00000605849 3329 ntBASIC14.55□□□□□ -0.08
SLC28A2O43868 AC138028.6-201ENST00000616106 1482 ntBASIC14.55□□□□□ -0.08
SLC28A2O43868 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SLC28A2O43868 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC28A2O43868 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 LINC01101-201ENST00000622953 1884 ntBASIC14.55□□□□□ -0.08
SLC28A2O43868 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC28A2O43868 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC28A2O43868 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.54□□□□□ -0.08
SLC28A2O43868 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.54□□□□□ -0.08
SLC28A2O43868 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.54□□□□□ -0.08
SLC28A2O43868 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SLC28A2O43868 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC28A2O43868 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms