Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.12□□□□□ -0.31
XRCC2O43543 SPDYE22P-201ENST00000582158 798 ntBASIC13.12□□□□□ -0.31
XRCC2O43543 LINC02560-201ENST00000596379 459 ntBASIC13.12□□□□□ -0.31
XRCC2O43543 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.12□□□□□ -0.31
XRCC2O43543 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
XRCC2O43543 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.12□□□□□ -0.31
XRCC2O43543 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.12□□□□□ -0.31
XRCC2O43543 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
XRCC2O43543 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
XRCC2O43543 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
XRCC2O43543 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
XRCC2O43543 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
XRCC2O43543 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
XRCC2O43543 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
XRCC2O43543 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
XRCC2O43543 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
XRCC2O43543 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
XRCC2O43543 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
XRCC2O43543 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.12□□□□□ -0.31
XRCC2O43543 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
XRCC2O43543 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
XRCC2O43543 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
XRCC2O43543 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
XRCC2O43543 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
XRCC2O43543 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.12□□□□□ -0.31
XRCC2O43543 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
XRCC2O43543 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.12□□□□□ -0.31
XRCC2O43543 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
XRCC2O43543 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
XRCC2O43543 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
XRCC2O43543 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
XRCC2O43543 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
XRCC2O43543 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
XRCC2O43543 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.12□□□□□ -0.31
XRCC2O43543 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.11□□□□□ -0.31
XRCC2O43543 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.11□□□□□ -0.31
XRCC2O43543 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.11□□□□□ -0.31
XRCC2O43543 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
XRCC2O43543 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 AC018665.1-201ENST00000622927 1362 ntBASIC13.11□□□□□ -0.31
XRCC2O43543 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
XRCC2O43543 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.11□□□□□ -0.31
XRCC2O43543 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 AL162726.2-201ENST00000438986 1017 ntBASIC13.11□□□□□ -0.31
XRCC2O43543 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.11□□□□□ -0.31
XRCC2O43543 AC022616.1-201ENST00000518688 554 ntBASIC13.11□□□□□ -0.31
XRCC2O43543 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.11□□□□□ -0.31
XRCC2O43543 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 ENPP7P5-201ENST00000541031 1031 ntBASIC13.11□□□□□ -0.31
XRCC2O43543 SPCS2P1-201ENST00000561636 679 ntBASIC13.11□□□□□ -0.31
XRCC2O43543 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
XRCC2O43543 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.11□□□□□ -0.31
XRCC2O43543 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
XRCC2O43543 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.11□□□□□ -0.31
XRCC2O43543 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.11□□□□□ -0.31
XRCC2O43543 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
XRCC2O43543 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XRCC2O43543 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.11□□□□□ -0.31
XRCC2O43543 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
XRCC2O43543 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.1□□□□□ -0.31
XRCC2O43543 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.1□□□□□ -0.31
XRCC2O43543 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.1□□□□□ -0.31
XRCC2O43543 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
XRCC2O43543 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
XRCC2O43543 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms