Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
CDC7O00311 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CDC7O00311 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC7O00311 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.75□□□□□ -0.05
CDC7O00311 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.75□□□□□ -0.05
CDC7O00311 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CDC7O00311 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CDC7O00311 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.75□□□□□ -0.05
CDC7O00311 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
CDC7O00311 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.75□□□□□ -0.05
CDC7O00311 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC7O00311 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 AC093433.1-201ENST00000458048 571 ntBASIC14.75□□□□□ -0.05
CDC7O00311 GIMAP3P-201ENST00000495150 836 ntBASIC14.75□□□□□ -0.05
CDC7O00311 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.75□□□□□ -0.05
CDC7O00311 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CDC7O00311 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.75□□□□□ -0.05
CDC7O00311 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.75□□□□□ -0.05
CDC7O00311 ENPP7P5-201ENST00000541031 1031 ntBASIC14.75□□□□□ -0.05
CDC7O00311 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CDC7O00311 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC7O00311 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CDC7O00311 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CDC7O00311 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CDC7O00311 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.75□□□□□ -0.05
CDC7O00311 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CDC7O00311 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC7O00311 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
CDC7O00311 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CDC7O00311 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC7O00311 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDC7O00311 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC7O00311 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC7O00311 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.74□□□□□ -0.05
CDC7O00311 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.74□□□□□ -0.05
CDC7O00311 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.74□□□□□ -0.05
CDC7O00311 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDC7O00311 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CDC7O00311 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
CDC7O00311 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC7O00311 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDC7O00311 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC7O00311 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC7O00311 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC7O00311 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC7O00311 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CDC7O00311 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.74□□□□□ -0.05
CDC7O00311 DGCR5-201ENST00000399539 862 ntBASIC14.74□□□□□ -0.05
CDC7O00311 ACTBP8-201ENST00000403258 1108 ntBASIC14.74□□□□□ -0.05
CDC7O00311 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.74□□□□□ -0.05
CDC7O00311 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC7O00311 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.74□□□□□ -0.05
CDC7O00311 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDC7O00311 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.74□□□□□ -0.05
CDC7O00311 AP001063.1-201ENST00000568332 529 ntBASIC14.74□□□□□ -0.05
CDC7O00311 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.74□□□□□ -0.05
CDC7O00311 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC7O00311 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.74□□□□□ -0.05
CDC7O00311 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CDC7O00311 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.74□□□□□ -0.05
CDC7O00311 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.74□□□□□ -0.05
CDC7O00311 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDC7O00311 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CDC7O00311 AC027601.5-201ENST00000624065 2482 ntBASIC14.74□□□□□ -0.05
CDC7O00311 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.74□□□□□ -0.05
CDC7O00311 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.74□□□□□ -0.05
CDC7O00311 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDC7O00311 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDC7O00311 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDC7O00311 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CDC7O00311 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC7O00311 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.74□□□□□ -0.05
CDC7O00311 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDC7O00311 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC7O00311 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
CDC7O00311 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC7O00311 AC015802.1-201ENST00000588104 1449 ntBASIC14.74□□□□□ -0.05
CDC7O00311 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms