Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 AC126335.2-201ENST00000623362 4637 ntBASIC10.56□□□□□ -0.72
LINC01546A6NGU7 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 AC243562.1-201ENST00000560672 389 ntBASIC10.56□□□□□ -0.72
LINC01546A6NGU7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 STK25-235ENST00000543554 2556 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
LINC01546A6NGU7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 SPCS2P4-201ENST00000436160 681 ntBASIC10.55□□□□□ -0.72
LINC01546A6NGU7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 GAPDHP40-201ENST00000505218 1006 ntBASIC10.55□□□□□ -0.72
LINC01546A6NGU7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms