Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 VDAC1P7-201ENST00000462417 847 ntBASIC15.97■□□□□ 0.15
RCCD1A6NED2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.97■□□□□ 0.15
RCCD1A6NED2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.97■□□□□ 0.15
RCCD1A6NED2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 AL049840.4-201ENST00000602422 811 ntBASIC15.97■□□□□ 0.15
RCCD1A6NED2 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.97■□□□□ 0.15
RCCD1A6NED2 AL034417.3-201ENST00000641100 1043 ntBASIC15.97■□□□□ 0.15
RCCD1A6NED2 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RCCD1A6NED2 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RCCD1A6NED2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.97■□□□□ 0.15
RCCD1A6NED2 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RCCD1A6NED2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RCCD1A6NED2 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.97■□□□□ 0.15
RCCD1A6NED2 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RCCD1A6NED2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RCCD1A6NED2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RCCD1A6NED2 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RCCD1A6NED2 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RCCD1A6NED2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RCCD1A6NED2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RCCD1A6NED2 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RCCD1A6NED2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RCCD1A6NED2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RCCD1A6NED2 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RCCD1A6NED2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RCCD1A6NED2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RCCD1A6NED2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RCCD1A6NED2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RCCD1A6NED2 ANKRD19P-201ENST00000338192 862 ntBASIC15.96■□□□□ 0.15
RCCD1A6NED2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RCCD1A6NED2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RCCD1A6NED2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 AC004967.1-201ENST00000453589 447 ntBASIC15.96■□□□□ 0.15
RCCD1A6NED2 MYADML-201ENST00000474610 2147 ntBASIC15.96■□□□□ 0.15
RCCD1A6NED2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 TMEM198B-204ENST00000484016 896 ntBASIC15.96■□□□□ 0.15
RCCD1A6NED2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RCCD1A6NED2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 AL158211.3-201ENST00000607385 239 ntBASIC15.96■□□□□ 0.15
RCCD1A6NED2 AC107308.1-201ENST00000615897 301 ntBASIC15.96■□□□□ 0.15
RCCD1A6NED2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 AL161772.1-201ENST00000610494 4412 ntBASIC15.96■□□□□ 0.15
RCCD1A6NED2 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.96■□□□□ 0.15
RCCD1A6NED2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
RCCD1A6NED2 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
RCCD1A6NED2 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RCCD1A6NED2 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RCCD1A6NED2 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.96■□□□□ 0.14
RCCD1A6NED2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RCCD1A6NED2 AC011498.7-201ENST00000624986 2027 ntBASIC15.95■□□□□ 0.14
RCCD1A6NED2 OR2I1P-210ENST00000642037 4691 ntBASIC15.95■□□□□ 0.14
RCCD1A6NED2 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.95■□□□□ 0.14
RCCD1A6NED2 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.95■□□□□ 0.14
RCCD1A6NED2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.95■□□□□ 0.14
RCCD1A6NED2 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RCCD1A6NED2 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.95■□□□□ 0.14
RCCD1A6NED2 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.95■□□□□ 0.14
RCCD1A6NED2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RCCD1A6NED2 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RCCD1A6NED2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RCCD1A6NED2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RCCD1A6NED2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.95■□□□□ 0.14
RCCD1A6NED2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
RCCD1A6NED2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.95■□□□□ 0.14
RCCD1A6NED2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.95■□□□□ 0.14
RCCD1A6NED2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.95■□□□□ 0.14
RCCD1A6NED2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.95■□□□□ 0.14
RCCD1A6NED2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.95■□□□□ 0.14
RCCD1A6NED2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.95■□□□□ 0.14
RCCD1A6NED2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RCCD1A6NED2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RCCD1A6NED2 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RCCD1A6NED2 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RCCD1A6NED2 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms