Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 IMP3P2-201ENST00000489760 475 ntBASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 AC016629.1-201ENST00000596579 586 ntBASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 REXO1L2P-201ENST00000425429 2069 ntBASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 SSR4P1-203ENST00000599569 2260 ntBASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 TMBIM7P-203ENST00000641617 1718 ntBASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 AC003102.2-201ENST00000589195 1469 ntBASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 WASH3P-207ENST00000560956 1394 ntBASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 AC012441.2-201ENST00000444843 739 ntBASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 PUDPP3-201ENST00000445368 636 ntBASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 MARK2P5-201ENST00000507649 634 ntBASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 AC008805.1-201ENST00000590892 364 ntBASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 AC007950.2-201ENST00000615045 2347 ntBASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.17■□□□□ 0.02
TBC1D3BA6NDS4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 AL157791.1-201ENST00000553667 1699 ntBASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 AC023090.2-201ENST00000625182 2110 ntBASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms