Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 RN7SKP214-201ENST00000364208 315 ntBASIC21.8■■□□□ 1.08
HFM1A2PYH4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC21.8■■□□□ 1.08
HFM1A2PYH4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HFM1A2PYH4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC21.8■■□□□ 1.08
HFM1A2PYH4 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC21.8■■□□□ 1.08
HFM1A2PYH4 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC21.8■■□□□ 1.08
HFM1A2PYH4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC21.8■■□□□ 1.08
HFM1A2PYH4 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC21.8■■□□□ 1.08
HFM1A2PYH4 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC21.8■■□□□ 1.08
HFM1A2PYH4 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC21.8■■□□□ 1.08
HFM1A2PYH4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HFM1A2PYH4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
HFM1A2PYH4 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HFM1A2PYH4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
HFM1A2PYH4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HFM1A2PYH4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HFM1A2PYH4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HFM1A2PYH4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HFM1A2PYH4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC21.79■■□□□ 1.08
HFM1A2PYH4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
HFM1A2PYH4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HFM1A2PYH4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HFM1A2PYH4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HFM1A2PYH4 AP001267.2-201ENST00000532619 2086 ntBASIC21.79■■□□□ 1.08
HFM1A2PYH4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC21.79■■□□□ 1.08
HFM1A2PYH4 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HFM1A2PYH4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HFM1A2PYH4 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC21.79■■□□□ 1.08
HFM1A2PYH4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC21.79■■□□□ 1.08
HFM1A2PYH4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
HFM1A2PYH4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
HFM1A2PYH4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC21.79■■□□□ 1.08
HFM1A2PYH4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
HFM1A2PYH4 MIR6074-201ENST00000612054 107 ntBASIC21.79■■□□□ 1.08
HFM1A2PYH4 AC015967.2-201ENST00000624092 234 ntBASIC21.79■■□□□ 1.08
HFM1A2PYH4 AC006435.4-201ENST00000625037 234 ntBASIC21.79■■□□□ 1.08
HFM1A2PYH4 AL356737.1-201ENST00000634391 234 ntBASIC21.79■■□□□ 1.08
HFM1A2PYH4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
HFM1A2PYH4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HFM1A2PYH4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HFM1A2PYH4 AC113367.3-201ENST00000508316 1912 ntBASIC21.78■■□□□ 1.08
HFM1A2PYH4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HFM1A2PYH4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HFM1A2PYH4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HFM1A2PYH4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
HFM1A2PYH4 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
HFM1A2PYH4 AHCYP4-201ENST00000419201 1315 ntBASIC21.78■■□□□ 1.08
HFM1A2PYH4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC21.78■■□□□ 1.08
HFM1A2PYH4 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC21.78■■□□□ 1.08
HFM1A2PYH4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HFM1A2PYH4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC21.78■■□□□ 1.08
HFM1A2PYH4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HFM1A2PYH4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HFM1A2PYH4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
HFM1A2PYH4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
HFM1A2PYH4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
HFM1A2PYH4 KRT8P21-201ENST00000430398 1491 ntBASIC21.78■■□□□ 1.08
HFM1A2PYH4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC21.78■■□□□ 1.08
HFM1A2PYH4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC21.78■■□□□ 1.08
HFM1A2PYH4 AC215219.1-201ENST00000400706 1817 ntBASIC21.78■■□□□ 1.08
HFM1A2PYH4 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HFM1A2PYH4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC21.78■■□□□ 1.08
HFM1A2PYH4 PDIA3P2-201ENST00000428073 158 ntBASIC21.78■■□□□ 1.08
HFM1A2PYH4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC21.78■■□□□ 1.08
HFM1A2PYH4 AL161932.2-201ENST00000435436 679 ntBASIC21.78■■□□□ 1.08
HFM1A2PYH4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC21.78■■□□□ 1.08
HFM1A2PYH4 AC091544.8-201ENST00000619490 361 ntBASIC21.78■■□□□ 1.08
HFM1A2PYH4 AC092299.1-201ENST00000632679 757 ntBASIC21.78■■□□□ 1.08
HFM1A2PYH4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
HFM1A2PYH4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HFM1A2PYH4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HFM1A2PYH4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC21.78■■□□□ 1.08
HFM1A2PYH4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HFM1A2PYH4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HFM1A2PYH4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
HFM1A2PYH4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
HFM1A2PYH4 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
HFM1A2PYH4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HFM1A2PYH4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
HFM1A2PYH4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC21.77■■□□□ 1.08
HFM1A2PYH4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC21.77■■□□□ 1.08
HFM1A2PYH4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HFM1A2PYH4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HFM1A2PYH4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
HFM1A2PYH4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HFM1A2PYH4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC21.77■■□□□ 1.08
HFM1A2PYH4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HFM1A2PYH4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC21.77■■□□□ 1.08
HFM1A2PYH4 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC21.77■■□□□ 1.08
HFM1A2PYH4 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC21.77■■□□□ 1.08
HFM1A2PYH4 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC21.77■■□□□ 1.08
HFM1A2PYH4 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC21.77■■□□□ 1.08
HFM1A2PYH4 RN7SL11P-201ENST00000471305 293 ntBASIC21.77■■□□□ 1.08
HFM1A2PYH4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC21.77■■□□□ 1.08
HFM1A2PYH4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HFM1A2PYH4 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
HFM1A2PYH4 PGAM1P5-201ENST00000548011 764 ntBASIC21.77■■□□□ 1.08
HFM1A2PYH4 AL161670.2-201ENST00000557650 1227 ntBASIC21.77■■□□□ 1.08
HFM1A2PYH4 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC21.77■■□□□ 1.08
HFM1A2PYH4 AC104506.1-201ENST00000609247 429 ntBASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms