Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SHISA3A0PJX4 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.08□□□□□ -0.31
SHISA3A0PJX4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.08□□□□□ -0.31
SHISA3A0PJX4 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
SHISA3A0PJX4 AL035456.1-201ENST00000456064 1369 ntBASIC13.08□□□□□ -0.31
SHISA3A0PJX4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SHISA3A0PJX4 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 MED15P5-201ENST00000423150 992 ntBASIC13.08□□□□□ -0.32
SHISA3A0PJX4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 GAPDHP40-201ENST00000505218 1006 ntBASIC13.08□□□□□ -0.32
SHISA3A0PJX4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 SLC25A1P1-201ENST00000528351 927 ntBASIC13.08□□□□□ -0.32
SHISA3A0PJX4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 AC093520.2-201ENST00000561830 333 ntBASIC13.08□□□□□ -0.32
SHISA3A0PJX4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 AC011840.2-201ENST00000563063 1520 ntBASIC13.08□□□□□ -0.32
SHISA3A0PJX4 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 AC126755.1-201ENST00000525846 6405 ntBASIC13.08□□□□□ -0.32
SHISA3A0PJX4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SHISA3A0PJX4 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 ZNF259P1-201ENST00000407656 1365 ntBASIC13.07□□□□□ -0.32
SHISA3A0PJX4 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 BEND3P3-201ENST00000611030 2440 ntBASIC13.07□□□□□ -0.32
SHISA3A0PJX4 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SHISA3A0PJX4 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms