Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LOC102724428A0A0B4J2F2 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 DBP-202ENST00000593500 712 ntTSL 2 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC138466.4-201ENST00000623965 852 ntBASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC126365.1-201ENST00000578585 1514 ntBASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
LOC102724428A0A0B4J2F2 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 WASH3P-207ENST00000560956 1394 ntBASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 LINC01101-201ENST00000622953 1884 ntBASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 GUSBP10-201ENST00000417412 665 ntBASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 LINC00634-202ENST00000505157 222 ntBASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 FO393412.1-201ENST00000619841 382 ntBASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 AC138466.5-201ENST00000624002 808 ntBASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 AL118508.1-201ENST00000613502 2345 ntBASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LOC102724428A0A0B4J2F2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LOC102724428A0A0B4J2F2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LOC102724428A0A0B4J2F2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LOC102724428A0A0B4J2F2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.71■□□□□ 0.59
LOC102724428A0A0B4J2F2 AL136172.1-201ENST00000598590 1394 ntBASIC18.71■□□□□ 0.59
LOC102724428A0A0B4J2F2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LOC102724428A0A0B4J2F2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LOC102724428A0A0B4J2F2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.71■□□□□ 0.59
LOC102724428A0A0B4J2F2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.71■□□□□ 0.59
LOC102724428A0A0B4J2F2 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LOC102724428A0A0B4J2F2 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LOC102724428A0A0B4J2F2 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC18.71■□□□□ 0.59
LOC102724428A0A0B4J2F2 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC18.71■□□□□ 0.59
LOC102724428A0A0B4J2F2 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms