Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 KRT8P12-202ENST00000472924 1397 ntBASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 AC018529.1-201ENST00000613063 361 ntBASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 AC055717.3-201ENST00000622967 595 ntBASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAV18A0A075B6X5 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 TCAF1P1-201ENST00000414990 2232 ntBASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 AL731571.1-201ENST00000617058 5428 ntBASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 AC105206.1-202ENST00000314927 2368 ntBASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 SAMD11P1-201ENST00000571429 661 ntBASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 AC003101.2-201ENST00000612557 442 ntBASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TRAV18A0A075B6X5 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms