Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 AL671277.1-201ENST00000429656 993 ntBASIC14.25□□□□□ -0.13
AP4S1Q9Y587 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 AL049840.3-201ENST00000602669 611 ntBASIC14.25□□□□□ -0.13
AP4S1Q9Y587 AC116407.3-201ENST00000623905 1129 ntBASIC14.25□□□□□ -0.13
AP4S1Q9Y587 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 FAM90A12P-201ENST00000519497 2375 ntBASIC14.25□□□□□ -0.13
AP4S1Q9Y587 FAM90A24P-201ENST00000520792 2369 ntBASIC14.25□□□□□ -0.13
AP4S1Q9Y587 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 AP3S2-216ENST00000617003 1561 ntBASIC14.25□□□□□ -0.13
AP4S1Q9Y587 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP4S1Q9Y587 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 AC020658.7-201ENST00000624274 2442 ntBASIC14.24□□□□□ -0.13
AP4S1Q9Y587 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 AC079776.4-201ENST00000511039 504 ntBASIC14.24□□□□□ -0.13
AP4S1Q9Y587 SLED1-202ENST00000512051 380 ntBASIC14.24□□□□□ -0.13
AP4S1Q9Y587 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 MIR7706-201ENST00000613747 67 ntBASIC14.24□□□□□ -0.13
AP4S1Q9Y587 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 CICP16-201ENST00000502609 2813 ntBASIC14.24□□□□□ -0.13
AP4S1Q9Y587 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.24□□□□□ -0.13
AP4S1Q9Y587 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.23□□□□□ -0.13
AP4S1Q9Y587 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms