Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF6Q9Y4K3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF6Q9Y4K3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF6Q9Y4K3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAF6Q9Y4K3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAF6Q9Y4K3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAF6Q9Y4K3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF6Q9Y4K3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF6Q9Y4K3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF6Q9Y4K3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAF6Q9Y4K3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 AL138799.1-201ENST00000448213 1675 ntBASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 AC007326.2-201ENST00000624224 7579 ntBASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 DNAJB3-202ENST00000449667 1266 ntBASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 AL158211.3-201ENST00000607385 239 ntBASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAF6Q9Y4K3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 AC026410.3-201ENST00000514280 936 ntBASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 BTBD7P1-201ENST00000447253 1453 ntBASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 CICP20-201ENST00000443330 2801 ntBASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAF6Q9Y4K3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms